Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 AC073413.1-201ENST00000603927 732 ntBASIC12.64□□□□□ -0.39
GCM1Q9NP62 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GCM1Q9NP62 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.64□□□□□ -0.39
GCM1Q9NP62 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 AC018442.1-201ENST00000421439 2061 ntBASIC12.63□□□□□ -0.39
GCM1Q9NP62 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 AC013726.1-201ENST00000563747 2285 ntBASIC12.63□□□□□ -0.39
GCM1Q9NP62 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 RN7SKP175-201ENST00000408472 289 ntBASIC12.63□□□□□ -0.39
GCM1Q9NP62 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 RPS2P32-201ENST00000439199 892 ntBASIC12.63□□□□□ -0.39
GCM1Q9NP62 CNN2P10-201ENST00000443067 918 ntBASIC12.63□□□□□ -0.39
GCM1Q9NP62 HOMER2P2-201ENST00000451621 847 ntBASIC12.63□□□□□ -0.39
GCM1Q9NP62 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.63□□□□□ -0.39
GCM1Q9NP62 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 AC010328.2-201ENST00000597698 1111 ntBASIC12.63□□□□□ -0.39
GCM1Q9NP62 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.63□□□□□ -0.39
GCM1Q9NP62 AC018529.2-202ENST00000611482 3087 ntBASIC12.63□□□□□ -0.39
GCM1Q9NP62 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
GCM1Q9NP62 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.62□□□□□ -0.39
GCM1Q9NP62 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 FAM45BP-202ENST00000592932 1624 ntBASIC12.62□□□□□ -0.39
GCM1Q9NP62 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.62□□□□□ -0.39
GCM1Q9NP62 REXO1L1P-201ENST00000379010 6598 ntBASIC12.62□□□□□ -0.39
GCM1Q9NP62 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC12.62□□□□□ -0.39
GCM1Q9NP62 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
GCM1Q9NP62 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.62□□□□□ -0.39
GCM1Q9NP62 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC12.62□□□□□ -0.39
GCM1Q9NP62 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 SNX18-202ENST00000343017 3140 ntBASIC12.62□□□□□ -0.39
GCM1Q9NP62 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.62□□□□□ -0.39
GCM1Q9NP62 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
GCM1Q9NP62 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC12.62□□□□□ -0.39
GCM1Q9NP62 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.62□□□□□ -0.39
GCM1Q9NP62 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms