Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.58■□□□□ 0.08
CD248Q9HCU0 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
CD248Q9HCU0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CD248Q9HCU0 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC15.58■□□□□ 0.08
CD248Q9HCU0 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 C2-206ENST00000442278 2434 ntTSL 2 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 CICP11-201ENST00000434745 2827 ntBASIC15.57■□□□□ 0.08
CD248Q9HCU0 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 MIR326-201ENST00000362220 95 ntBASIC15.57■□□□□ 0.08
CD248Q9HCU0 RNU1-114P-201ENST00000365297 166 ntBASIC15.57■□□□□ 0.08
CD248Q9HCU0 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 CD8B2-202ENST00000417670 633 ntBASIC15.57■□□□□ 0.08
CD248Q9HCU0 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.57■□□□□ 0.08
CD248Q9HCU0 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 MIR3615-201ENST00000581999 87 ntBASIC15.57■□□□□ 0.08
CD248Q9HCU0 AC103810.3-201ENST00000583567 96 ntBASIC15.57■□□□□ 0.08
CD248Q9HCU0 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC15.57■□□□□ 0.08
CD248Q9HCU0 AC138951.2-201ENST00000623455 1161 ntBASIC15.57■□□□□ 0.08
CD248Q9HCU0 AL139099.5-201ENST00000635274 300 ntBASIC15.57■□□□□ 0.08
CD248Q9HCU0 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CD248Q9HCU0 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.57■□□□□ 0.08
CD248Q9HCU0 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 AC073869.1-201ENST00000415574 2762 ntBASIC15.56■□□□□ 0.08
CD248Q9HCU0 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 KLF2P2-201ENST00000416807 1039 ntBASIC15.56■□□□□ 0.08
CD248Q9HCU0 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 AC006033.1-201ENST00000440505 426 ntBASIC15.56■□□□□ 0.08
CD248Q9HCU0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 AL590640.2-201ENST00000457038 527 ntBASIC15.56■□□□□ 0.08
CD248Q9HCU0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 RNA5SP486-201ENST00000515961 83 ntBASIC15.56■□□□□ 0.08
CD248Q9HCU0 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 AC006453.4-201ENST00000636949 1252 ntBASIC15.56■□□□□ 0.08
CD248Q9HCU0 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CD248Q9HCU0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC15.56■□□□□ 0.08
CD248Q9HCU0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms