Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-CQ95604 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-CQ95604 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
HLA-CQ95604 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-CQ95604 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HLA-CQ95604 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-CQ95604 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
HLA-CQ95604 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 AC099398.1-201ENST00000567919 2776 ntBASIC14.94□□□□□ -0.02
HLA-CQ95604 VDAC2-202ENST00000313132 1467 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 SSR4P1-203ENST00000599569 2260 ntBASIC14.94□□□□□ -0.02
HLA-CQ95604 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-CQ95604 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.94□□□□□ -0.02
HLA-CQ95604 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.94□□□□□ -0.02
HLA-CQ95604 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
HLA-CQ95604 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
HLA-CQ95604 AL008638.4-201ENST00000624792 1315 ntBASIC14.93□□□□□ -0.02
HLA-CQ95604 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 AP000845.1-201ENST00000581677 2131 ntBASIC14.93□□□□□ -0.02
HLA-CQ95604 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-CQ95604 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-CQ95604 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
HLA-CQ95604 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.93□□□□□ -0.02
HLA-CQ95604 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-CQ95604 FAU-201ENST00000279259 461 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-CQ95604 RPL14-203ENST00000416518 812 ntTSL 3 BASIC14.93□□□□□ -0.02
HLA-CQ95604 AHCYP3-201ENST00000420053 1279 ntBASIC14.93□□□□□ -0.02
HLA-CQ95604 KATNBL1P2-201ENST00000433311 835 ntBASIC14.93□□□□□ -0.02
HLA-CQ95604 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC14.93□□□□□ -0.02
HLA-CQ95604 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
HLA-CQ95604 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
HLA-CQ95604 AC097381.2-201ENST00000510640 859 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-CQ95604 RN7SKP155-201ENST00000516031 288 ntBASIC14.93□□□□□ -0.02
HLA-CQ95604 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HLA-CQ95604 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HLA-CQ95604 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC14.93□□□□□ -0.02
HLA-CQ95604 DLK1-205ENST00000556051 469 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-CQ95604 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC14.93□□□□□ -0.02
HLA-CQ95604 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.93□□□□□ -0.02
HLA-CQ95604 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC14.93□□□□□ -0.02
HLA-CQ95604 RARS-210ENST00000626454 177 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-CQ95604 AC092135.3-201ENST00000624151 1846 ntBASIC14.93□□□□□ -0.02
HLA-CQ95604 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-CQ95604 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-CQ95604 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-CQ95604 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
HLA-CQ95604 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
HLA-CQ95604 AC139712.1-201ENST00000378256 1875 ntBASIC14.93□□□□□ -0.02
HLA-CQ95604 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-CQ95604 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC14.92□□□□□ -0.02
HLA-CQ95604 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-CQ95604 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-CQ95604 CMIP-202ENST00000537098 4357 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-CQ95604 ODCP-201ENST00000459650 1639 ntBASIC14.92□□□□□ -0.02
HLA-CQ95604 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-CQ95604 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-CQ95604 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-CQ95604 AL365181.1-201ENST00000564032 1828 ntBASIC14.92□□□□□ -0.02
HLA-CQ95604 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HLA-CQ95604 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-CQ95604 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HLA-CQ95604 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-CQ95604 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-CQ95604 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-CQ95604 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-CQ95604 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HLA-CQ95604 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-CQ95604 AL157823.1-201ENST00000403727 628 ntBASIC14.92□□□□□ -0.02
HLA-CQ95604 LINC00265-2P-201ENST00000413372 782 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms