Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
AP3S1Q92572 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
AP3S1Q92572 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC13□□□□□ -0.33
AP3S1Q92572 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
AP3S1Q92572 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
AP3S1Q92572 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
AP3S1Q92572 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
AP3S1Q92572 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13□□□□□ -0.33
AP3S1Q92572 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 AC011498.7-201ENST00000624986 2027 ntBASIC13□□□□□ -0.33
AP3S1Q92572 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13□□□□□ -0.33
AP3S1Q92572 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13□□□□□ -0.33
AP3S1Q92572 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
AP3S1Q92572 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
AP3S1Q92572 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC13□□□□□ -0.33
AP3S1Q92572 KRT18P64-201ENST00000434946 1219 ntBASIC13□□□□□ -0.33
AP3S1Q92572 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC13□□□□□ -0.33
AP3S1Q92572 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13□□□□□ -0.33
AP3S1Q92572 RNA5SP415-201ENST00000517246 115 ntBASIC13□□□□□ -0.33
AP3S1Q92572 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC13□□□□□ -0.33
AP3S1Q92572 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
AP3S1Q92572 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13□□□□□ -0.33
AP3S1Q92572 RMI2-205ENST00000576027 818 ntTSL 2 BASIC13□□□□□ -0.33
AP3S1Q92572 KRT18P8-201ENST00000581937 1246 ntBASIC13□□□□□ -0.33
AP3S1Q92572 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13□□□□□ -0.33
AP3S1Q92572 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13□□□□□ -0.33
AP3S1Q92572 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13□□□□□ -0.33
AP3S1Q92572 HFE2-206ENST00000634927 506 ntTSL 4 BASIC13□□□□□ -0.33
AP3S1Q92572 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
AP3S1Q92572 AC011481.3-201ENST00000623895 5594 ntBASIC13□□□□□ -0.33
AP3S1Q92572 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 AKAP13-201ENST00000361243 9468 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13□□□□□ -0.33
AP3S1Q92572 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC13□□□□□ -0.33
AP3S1Q92572 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
AP3S1Q92572 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
AP3S1Q92572 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.99□□□□□ -0.33
AP3S1Q92572 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.99□□□□□ -0.33
AP3S1Q92572 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.99□□□□□ -0.33
AP3S1Q92572 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.99□□□□□ -0.33
AP3S1Q92572 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
AP3S1Q92572 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
AP3S1Q92572 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.99□□□□□ -0.33
AP3S1Q92572 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 AL391647.1-201ENST00000395664 511 ntBASIC12.99□□□□□ -0.33
AP3S1Q92572 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC12.99□□□□□ -0.33
AP3S1Q92572 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC12.99□□□□□ -0.33
AP3S1Q92572 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC12.99□□□□□ -0.33
AP3S1Q92572 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP3S1Q92572 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
AP3S1Q92572 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC12.99□□□□□ -0.33
AP3S1Q92572 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
AP3S1Q92572 AC034105.1-201ENST00000563488 319 ntBASIC12.99□□□□□ -0.33
AP3S1Q92572 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.99□□□□□ -0.33
AP3S1Q92572 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms