Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 MIR1908-201ENST00000410394 80 ntBASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 PUDPP3-201ENST00000445368 636 ntBASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 AC073413.1-201ENST00000603927 732 ntBASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
SMARCC2Q8TAQ2 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 ACTBP11-201ENST00000436287 1126 ntBASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 PPY2P-201ENST00000582808 702 ntBASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 BEND3P1-201ENST00000421591 1944 ntBASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMARCC2Q8TAQ2 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 KRT8P4-201ENST00000509735 1454 ntBASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 AC004945.1-201ENST00000416738 983 ntBASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 Z93015.1-201ENST00000451718 390 ntBASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.18■□□□□ 0.34
SMARCC2Q8TAQ2 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms