Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 AC105250.1-201ENST00000509378 2057 ntBASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 LTB4R2-202ENST00000528054 3092 ntBASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 TMEM60-201ENST00000257663 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 OLA1P2-201ENST00000395519 1264 ntBASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 RN7SL665P-201ENST00000578793 300 ntBASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.15□□□□□ -0.46
CCDC168Q8NDH2 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC12.15□□□□□ -0.47
CCDC168Q8NDH2 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC12.15□□□□□ -0.47
CCDC168Q8NDH2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
CCDC168Q8NDH2 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CCDC168Q8NDH2 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC12.15□□□□□ -0.47
CCDC168Q8NDH2 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 HLF-202ENST00000430986 1385 ntTSL 2 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 DKKL1P1-201ENST00000400550 698 ntBASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 AC008026.2-201ENST00000495438 348 ntBASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 CBR3-AS1-206ENST00000608632 659 ntTSL 5 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 AC138761.6-201ENST00000583997 1423 ntBASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 AL596087.1-201ENST00000400979 1969 ntBASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 FUCA1P1-201ENST00000374476 1351 ntBASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 RPL5P21-201ENST00000404620 815 ntBASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 SOD2-205ENST00000444946 917 ntTSL 2 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 RN7SL767P-201ENST00000493013 295 ntBASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 AC026412.1-206ENST00000502273 206 ntBASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 AC120498.5-201ENST00000561757 299 ntBASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CCDC168Q8NDH2 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms