Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 RN7SKP175-201ENST00000408472 289 ntBASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 CNN2P8-201ENST00000421872 913 ntBASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 FAM8A4P-201ENST00000435433 1213 ntBASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 KRT17P7-201ENST00000451704 1104 ntBASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 AC007551.1-201ENST00000457394 519 ntBASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 ECM1P1-201ENST00000604092 1279 ntBASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 MIR6074-201ENST00000612054 107 ntBASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 IGHV3-72-202ENST00000621503 303 ntBASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 AC006453.4-201ENST00000636949 1252 ntBASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 PEG13-201ENST00000631594 5667 ntBASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 AC015688.4-201ENST00000580780 1647 ntBASIC11.68□□□□□ -0.54
TTC9CQ8N5M4 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 TMEM14DP-201ENST00000422205 345 ntBASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 COX20P2-201ENST00000452636 358 ntBASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 AL391280.1-201ENST00000506969 1062 ntBASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 AC103988.2-201ENST00000561804 725 ntBASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 AP001002.3-201ENST00000623482 206 ntBASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 AC105233.6-201ENST00000642093 218 ntBASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
TTC9CQ8N5M4 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms