Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
LINC00346Q8IVM7 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 AL138709.1-201ENST00000614840 1693 ntBASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 AL391280.1-201ENST00000506969 1062 ntBASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 GCOM2-201ENST00000509133 1104 ntBASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 AC138696.2-201ENST00000607376 223 ntBASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 AC138466.3-201ENST00000619983 221 ntBASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 AC011498.7-201ENST00000624986 2027 ntBASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 CICP16-201ENST00000502609 2813 ntBASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC13.06□□□□□ -0.32
LINC00346Q8IVM7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 AC215219.1-201ENST00000400706 1817 ntBASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 AC090505.1-201ENST00000430515 1834 ntBASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
LINC00346Q8IVM7 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms