Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 AL035414.1-201ENST00000451327 857 ntBASIC14.12□□□□□ -0.15
RNF44Q7L0R7 FAM8A2P-201ENST00000528813 1142 ntBASIC14.12□□□□□ -0.15
RNF44Q7L0R7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 AC103988.2-201ENST00000561804 725 ntBASIC14.12□□□□□ -0.15
RNF44Q7L0R7 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 AC005730.2-201ENST00000564549 1184 ntBASIC14.12□□□□□ -0.15
RNF44Q7L0R7 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 MIR4538-201ENST00000581377 78 ntBASIC14.12□□□□□ -0.15
RNF44Q7L0R7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RNF44Q7L0R7 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 MTHFR-210ENST00000641407 2387 ntBASIC14.11□□□□□ -0.15
RNF44Q7L0R7 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.11□□□□□ -0.15
RNF44Q7L0R7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.11□□□□□ -0.15
RNF44Q7L0R7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 MIR6799-201ENST00000620297 69 ntBASIC14.11□□□□□ -0.15
RNF44Q7L0R7 AC027601.3-201ENST00000622907 509 ntBASIC14.11□□□□□ -0.15
RNF44Q7L0R7 AL008638.5-201ENST00000623814 1298 ntBASIC14.11□□□□□ -0.15
RNF44Q7L0R7 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.11□□□□□ -0.15
RNF44Q7L0R7 AL354702.1-201ENST00000442006 1960 ntBASIC14.11□□□□□ -0.15
RNF44Q7L0R7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF44Q7L0R7 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
RNF44Q7L0R7 AC018735.1-201ENST00000437208 1502 ntBASIC14.1□□□□□ -0.15
RNF44Q7L0R7 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF44Q7L0R7 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.1□□□□□ -0.15
RNF44Q7L0R7 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
RNF44Q7L0R7 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF44Q7L0R7 AC139712.1-201ENST00000378256 1875 ntBASIC14.1□□□□□ -0.15
RNF44Q7L0R7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
RNF44Q7L0R7 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
RNF44Q7L0R7 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms