Protein–RNA interactions for Protein: Q04656

ATP7A, Copper-transporting ATPase 1, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7AQ04656 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
ATP7AQ04656 CICP6-201ENST00000457191 2729 ntBASIC21.08■□□□□ 0.96
ATP7AQ04656 AC018529.2-202ENST00000611482 3087 ntBASIC21.08■□□□□ 0.96
ATP7AQ04656 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC21.08■□□□□ 0.96
ATP7AQ04656 AC015909.5-201ENST00000624336 2266 ntBASIC21.08■□□□□ 0.96
ATP7AQ04656 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC21.08■□□□□ 0.96
ATP7AQ04656 PDHB-201ENST00000302746 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATP7AQ04656 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP7AQ04656 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP7AQ04656 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP7AQ04656 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP7AQ04656 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP7AQ04656 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP7AQ04656 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP7AQ04656 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP7AQ04656 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP7AQ04656 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ATP7AQ04656 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP7AQ04656 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP7AQ04656 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP7AQ04656 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP7AQ04656 AL080243.1-201ENST00000423293 1060 ntBASIC21.07■□□□□ 0.96
ATP7AQ04656 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC21.07■□□□□ 0.96
ATP7AQ04656 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP7AQ04656 AC018846.1-201ENST00000568231 183 ntBASIC21.07■□□□□ 0.96
ATP7AQ04656 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC21.07■□□□□ 0.96
ATP7AQ04656 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC21.07■□□□□ 0.96
ATP7AQ04656 AC073869.4-201ENST00000620841 800 ntBASIC21.07■□□□□ 0.96
ATP7AQ04656 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC21.07■□□□□ 0.96
ATP7AQ04656 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP7AQ04656 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATP7AQ04656 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP7AQ04656 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP7AQ04656 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP7AQ04656 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ATP7AQ04656 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ATP7AQ04656 AC007952.5-201ENST00000572818 1486 ntBASIC21.07■□□□□ 0.96
ATP7AQ04656 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP7AQ04656 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP7AQ04656 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ATP7AQ04656 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATP7AQ04656 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP7AQ04656 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC21.07■□□□□ 0.96
ATP7AQ04656 ZNF691-201ENST00000372502 1910 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
ATP7AQ04656 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP7AQ04656 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC21.06■□□□□ 0.96
ATP7AQ04656 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP7AQ04656 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP7AQ04656 LINC00554-201ENST00000564841 3011 ntBASIC21.06■□□□□ 0.96
ATP7AQ04656 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP7AQ04656 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ATP7AQ04656 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC21.06■□□□□ 0.96
ATP7AQ04656 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP7AQ04656 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ATP7AQ04656 IFNWP2-201ENST00000431203 580 ntBASIC21.06■□□□□ 0.96
ATP7AQ04656 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP7AQ04656 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC21.06■□□□□ 0.96
ATP7AQ04656 AC100858.1-201ENST00000514059 1228 ntBASIC21.06■□□□□ 0.96
ATP7AQ04656 AC132825.4-202ENST00000578792 434 ntBASIC21.06■□□□□ 0.96
ATP7AQ04656 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP7AQ04656 PTPN20CP-201ENST00000614090 920 ntBASIC21.06■□□□□ 0.96
ATP7AQ04656 AC006486.2-201ENST00000624246 2199 ntBASIC21.06■□□□□ 0.96
ATP7AQ04656 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC21.06■□□□□ 0.96
ATP7AQ04656 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP7AQ04656 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP7AQ04656 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC21.06■□□□□ 0.96
ATP7AQ04656 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP7AQ04656 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ATP7AQ04656 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP7AQ04656 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP7AQ04656 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP7AQ04656 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP7AQ04656 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP7AQ04656 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
ATP7AQ04656 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP7AQ04656 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATP7AQ04656 USP39-220ENST00000613444 2161 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP7AQ04656 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ATP7AQ04656 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC21.05■□□□□ 0.96
ATP7AQ04656 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC21.05■□□□□ 0.96
ATP7AQ04656 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP7AQ04656 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP7AQ04656 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ATP7AQ04656 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATP7AQ04656 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP7AQ04656 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ATP7AQ04656 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC21.05■□□□□ 0.96
ATP7AQ04656 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC21.05■□□□□ 0.96
ATP7AQ04656 RN7SL351P-201ENST00000469306 248 ntBASIC21.05■□□□□ 0.96
ATP7AQ04656 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC21.05■□□□□ 0.96
ATP7AQ04656 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC21.05■□□□□ 0.96
ATP7AQ04656 AC074050.2-201ENST00000563338 538 ntTSL 3 BASIC21.05■□□□□ 0.96
ATP7AQ04656 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
ATP7AQ04656 AC129778.1-201ENST00000623957 920 ntTSL 5 BASIC21.05■□□□□ 0.96
ATP7AQ04656 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC21.05■□□□□ 0.96
ATP7AQ04656 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP7AQ04656 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
ATP7AQ04656 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC21.05■□□□□ 0.96
ATP7AQ04656 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
ATP7AQ04656 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms