Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LIMK1P53667 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.47□□□□□ -0.09
LIMK1P53667 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
LIMK1P53667 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
LIMK1P53667 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
LIMK1P53667 AL807761.2-201ENST00000422849 729 ntBASIC14.47□□□□□ -0.09
LIMK1P53667 SKA2-202ENST00000437036 625 ntTSL 2 BASIC14.47□□□□□ -0.09
LIMK1P53667 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.47□□□□□ -0.09
LIMK1P53667 ORAOV1P1-201ENST00000503108 395 ntBASIC14.47□□□□□ -0.09
LIMK1P53667 AP000911.2-201ENST00000534330 502 ntBASIC14.47□□□□□ -0.09
LIMK1P53667 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LIMK1P53667 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
LIMK1P53667 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC14.47□□□□□ -0.09
LIMK1P53667 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.47□□□□□ -0.09
LIMK1P53667 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.47□□□□□ -0.09
LIMK1P53667 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.47□□□□□ -0.09
LIMK1P53667 MIR6720-201ENST00000611664 98 ntBASIC14.47□□□□□ -0.09
LIMK1P53667 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 AP002414.2-201ENST00000591780 3365 ntBASIC14.47□□□□□ -0.09
LIMK1P53667 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 LINC01815-202ENST00000641468 1409 ntBASIC14.47□□□□□ -0.09
LIMK1P53667 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
LIMK1P53667 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
LIMK1P53667 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.47□□□□□ -0.09
LIMK1P53667 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LIMK1P53667 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 AC009093.2-202ENST00000620513 2079 ntBASIC14.46□□□□□ -0.09
LIMK1P53667 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
LIMK1P53667 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LIMK1P53667 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LIMK1P53667 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.46□□□□□ -0.09
LIMK1P53667 AC136759.1-202ENST00000530858 2194 ntBASIC14.46□□□□□ -0.09
LIMK1P53667 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
LIMK1P53667 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.46□□□□□ -0.09
LIMK1P53667 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
LIMK1P53667 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 CRIP3-202ENST00000372569 962 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 BANF1P3-201ENST00000412556 261 ntBASIC14.46□□□□□ -0.09
LIMK1P53667 RPSAP15-201ENST00000448168 861 ntBASIC14.46□□□□□ -0.09
LIMK1P53667 FTH1P22-201ENST00000456305 520 ntBASIC14.46□□□□□ -0.09
LIMK1P53667 AC084752.1-201ENST00000509766 622 ntBASIC14.46□□□□□ -0.09
LIMK1P53667 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.46□□□□□ -0.09
LIMK1P53667 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.46□□□□□ -0.09
LIMK1P53667 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC14.46□□□□□ -0.09
LIMK1P53667 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14.46□□□□□ -0.09
LIMK1P53667 HKR1-225ENST00000592168 566 ntTSL 4 BASIC14.46□□□□□ -0.09
LIMK1P53667 AC084781.1-201ENST00000613737 656 ntBASIC14.46□□□□□ -0.09
LIMK1P53667 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC14.46□□□□□ -0.09
LIMK1P53667 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
LIMK1P53667 KRT8P31-201ENST00000504812 1408 ntBASIC14.46□□□□□ -0.09
LIMK1P53667 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.46□□□□□ -0.09
LIMK1P53667 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
LIMK1P53667 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LIMK1P53667 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.1
LIMK1P53667 AC041040.2-201ENST00000622926 2899 ntBASIC14.46□□□□□ -0.1
LIMK1P53667 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
LIMK1P53667 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.46□□□□□ -0.1
LIMK1P53667 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.46□□□□□ -0.1
LIMK1P53667 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LIMK1P53667 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms