Protein–RNA interactions for Protein: P42771

CDKN2A, Cyclin-dependent kinase inhibitor 2A, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2AP42771 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CDKN2AP42771 RN7SKP175-201ENST00000408472 289 ntBASIC13.15□□□□□ -0.3
CDKN2AP42771 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.15□□□□□ -0.3
CDKN2AP42771 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.15□□□□□ -0.3
CDKN2AP42771 TERF1P3-201ENST00000505638 1227 ntBASIC13.15□□□□□ -0.3
CDKN2AP42771 ALG3P1-201ENST00000508806 1114 ntBASIC13.15□□□□□ -0.3
CDKN2AP42771 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.15□□□□□ -0.3
CDKN2AP42771 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CDKN2AP42771 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.15□□□□□ -0.3
CDKN2AP42771 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.15□□□□□ -0.3
CDKN2AP42771 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.15□□□□□ -0.3
CDKN2AP42771 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.15□□□□□ -0.3
CDKN2AP42771 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CDKN2AP42771 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
CDKN2AP42771 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
CDKN2AP42771 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
CDKN2AP42771 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.15□□□□□ -0.3
CDKN2AP42771 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CDKN2AP42771 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.31
CDKN2AP42771 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CDKN2AP42771 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
CDKN2AP42771 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CDKN2AP42771 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.14□□□□□ -0.31
CDKN2AP42771 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CDKN2AP42771 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.14□□□□□ -0.31
CDKN2AP42771 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.14□□□□□ -0.31
CDKN2AP42771 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CDKN2AP42771 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 TPM3P8-201ENST00000330554 643 ntBASIC13.14□□□□□ -0.31
CDKN2AP42771 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CDKN2AP42771 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC13.14□□□□□ -0.31
CDKN2AP42771 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC13.14□□□□□ -0.31
CDKN2AP42771 PUDPP3-201ENST00000445368 636 ntBASIC13.14□□□□□ -0.31
CDKN2AP42771 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.14□□□□□ -0.31
CDKN2AP42771 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.14□□□□□ -0.31
CDKN2AP42771 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 AP001889.1-201ENST00000525414 633 ntBASIC13.14□□□□□ -0.31
CDKN2AP42771 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.14□□□□□ -0.31
CDKN2AP42771 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.14□□□□□ -0.31
CDKN2AP42771 AC132938.4-201ENST00000623835 848 ntBASIC13.14□□□□□ -0.31
CDKN2AP42771 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.14□□□□□ -0.31
CDKN2AP42771 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.14□□□□□ -0.31
CDKN2AP42771 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
CDKN2AP42771 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
CDKN2AP42771 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
CDKN2AP42771 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CDKN2AP42771 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN2AP42771 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN2AP42771 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.13□□□□□ -0.31
CDKN2AP42771 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
CDKN2AP42771 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN2AP42771 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN2AP42771 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CDKN2AP42771 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN2AP42771 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN2AP42771 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.13□□□□□ -0.31
CDKN2AP42771 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.13□□□□□ -0.31
CDKN2AP42771 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN2AP42771 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.13□□□□□ -0.31
CDKN2AP42771 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
CDKN2AP42771 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
CDKN2AP42771 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDKN2AP42771 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms