Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.33□□□□□ -0.12
HNF4AP41235 AC234783.1-201ENST00000441761 496 ntBASIC14.33□□□□□ -0.12
HNF4AP41235 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.33□□□□□ -0.12
HNF4AP41235 ALG3P1-201ENST00000508806 1114 ntBASIC14.33□□□□□ -0.12
HNF4AP41235 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.33□□□□□ -0.12
HNF4AP41235 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.33□□□□□ -0.12
HNF4AP41235 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HNF4AP41235 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.33□□□□□ -0.12
HNF4AP41235 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.33□□□□□ -0.12
HNF4AP41235 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.33□□□□□ -0.12
HNF4AP41235 APOC4-201ENST00000591600 348 ntTSL 3 BASIC14.33□□□□□ -0.12
HNF4AP41235 BX088702.1-201ENST00000610784 235 ntBASIC14.33□□□□□ -0.12
HNF4AP41235 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.33□□□□□ -0.12
HNF4AP41235 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HNF4AP41235 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.33□□□□□ -0.12
HNF4AP41235 AC041040.2-201ENST00000622926 2899 ntBASIC14.33□□□□□ -0.12
HNF4AP41235 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HNF4AP41235 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HNF4AP41235 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
HNF4AP41235 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HNF4AP41235 AC020910.5-201ENST00000623668 1865 ntBASIC14.33□□□□□ -0.12
HNF4AP41235 AC117489.1-201ENST00000625169 3217 ntBASIC14.33□□□□□ -0.12
HNF4AP41235 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HNF4AP41235 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HNF4AP41235 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HNF4AP41235 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HNF4AP41235 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HNF4AP41235 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HNF4AP41235 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HNF4AP41235 AC079781.5-202ENST00000641784 3743 ntBASIC14.32□□□□□ -0.12
HNF4AP41235 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.32□□□□□ -0.12
HNF4AP41235 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HNF4AP41235 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.32□□□□□ -0.12
HNF4AP41235 MYADML-201ENST00000474610 2147 ntBASIC14.32□□□□□ -0.12
HNF4AP41235 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
HNF4AP41235 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.32□□□□□ -0.12
HNF4AP41235 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.32□□□□□ -0.12
HNF4AP41235 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
HNF4AP41235 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
HNF4AP41235 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.32□□□□□ -0.12
HNF4AP41235 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HNF4AP41235 AC138969.2-201ENST00000532739 9932 ntBASIC14.32□□□□□ -0.12
HNF4AP41235 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
HNF4AP41235 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.32□□□□□ -0.12
HNF4AP41235 U91328.1-201ENST00000437528 223 ntBASIC14.32□□□□□ -0.12
HNF4AP41235 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.32□□□□□ -0.12
HNF4AP41235 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 HILS1-202ENST00000545329 423 ntBASIC14.32□□□□□ -0.12
HNF4AP41235 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.32□□□□□ -0.12
HNF4AP41235 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.32□□□□□ -0.12
HNF4AP41235 MIR6074-201ENST00000612054 107 ntBASIC14.32□□□□□ -0.12
HNF4AP41235 AC138951.2-201ENST00000623455 1161 ntBASIC14.32□□□□□ -0.12
HNF4AP41235 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.32□□□□□ -0.12
HNF4AP41235 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.32□□□□□ -0.12
HNF4AP41235 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
HNF4AP41235 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.32□□□□□ -0.12
HNF4AP41235 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
HNF4AP41235 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.32□□□□□ -0.12
HNF4AP41235 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 AP000593.2-201ENST00000542775 1433 ntBASIC14.32□□□□□ -0.12
HNF4AP41235 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.32□□□□□ -0.12
HNF4AP41235 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
HNF4AP41235 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
HNF4AP41235 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
HNF4AP41235 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.31□□□□□ -0.12
HNF4AP41235 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HNF4AP41235 INE2-201ENST00000630399 1874 ntBASIC14.31□□□□□ -0.12
HNF4AP41235 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HNF4AP41235 PDIA3P1-201ENST00000471856 1510 ntBASIC14.31□□□□□ -0.12
HNF4AP41235 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
HNF4AP41235 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.31□□□□□ -0.12
HNF4AP41235 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC14.31□□□□□ -0.12
HNF4AP41235 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC14.31□□□□□ -0.12
HNF4AP41235 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
HNF4AP41235 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HNF4AP41235 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HNF4AP41235 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC14.31□□□□□ -0.12
HNF4AP41235 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HNF4AP41235 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HNF4AP41235 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HNF4AP41235 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HNF4AP41235 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
HNF4AP41235 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms