Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC17.88■□□□□ 0.45
PDE6BP35913 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6BP35913 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6BP35913 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6BP35913 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6BP35913 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC17.88■□□□□ 0.45
PDE6BP35913 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC17.88■□□□□ 0.45
PDE6BP35913 HINT1-205ENST00000508488 703 ntTSL 2 BASIC17.88■□□□□ 0.45
PDE6BP35913 AC134312.2-201ENST00000563521 608 ntTSL 2 BASIC17.88■□□□□ 0.45
PDE6BP35913 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC17.88■□□□□ 0.45
PDE6BP35913 AP005212.2-201ENST00000584979 510 ntBASIC17.88■□□□□ 0.45
PDE6BP35913 PEBP1P2-201ENST00000603980 558 ntBASIC17.88■□□□□ 0.45
PDE6BP35913 AC012073.1-201ENST00000606114 1108 ntBASIC17.88■□□□□ 0.45
PDE6BP35913 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.88■□□□□ 0.45
PDE6BP35913 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6BP35913 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6BP35913 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6BP35913 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6BP35913 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
PDE6BP35913 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6BP35913 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
PDE6BP35913 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
PDE6BP35913 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6BP35913 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.88■□□□□ 0.45
PDE6BP35913 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6BP35913 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6BP35913 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PDE6BP35913 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PDE6BP35913 AL672207.1-201ENST00000328462 1570 ntBASIC17.87■□□□□ 0.45
PDE6BP35913 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 AC103702.1-201ENST00000548801 2630 ntBASIC17.87■□□□□ 0.45
PDE6BP35913 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 AL591122.2-201ENST00000624125 1853 ntBASIC17.87■□□□□ 0.45
PDE6BP35913 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC17.87■□□□□ 0.45
PDE6BP35913 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 RN7SL767P-201ENST00000493013 295 ntBASIC17.87■□□□□ 0.45
PDE6BP35913 AC093826.1-201ENST00000508655 993 ntBASIC17.87■□□□□ 0.45
PDE6BP35913 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC17.87■□□□□ 0.45
PDE6BP35913 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC17.87■□□□□ 0.45
PDE6BP35913 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC17.87■□□□□ 0.45
PDE6BP35913 AP005264.6-204ENST00000588436 719 ntBASIC17.87■□□□□ 0.45
PDE6BP35913 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
PDE6BP35913 AL118522.1-201ENST00000611368 560 ntBASIC17.87■□□□□ 0.45
PDE6BP35913 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.87■□□□□ 0.45
PDE6BP35913 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC17.87■□□□□ 0.45
PDE6BP35913 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.87■□□□□ 0.45
PDE6BP35913 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.87■□□□□ 0.45
PDE6BP35913 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
PDE6BP35913 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
PDE6BP35913 AC015688.4-201ENST00000580780 1647 ntBASIC17.87■□□□□ 0.45
PDE6BP35913 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.87■□□□□ 0.45
PDE6BP35913 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
PDE6BP35913 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.87■□□□□ 0.45
PDE6BP35913 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
PDE6BP35913 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
PDE6BP35913 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.86■□□□□ 0.45
PDE6BP35913 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.86■□□□□ 0.45
PDE6BP35913 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
PDE6BP35913 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC17.86■□□□□ 0.45
PDE6BP35913 BAX-205ENST00000391871 687 ntTSL 5 BASIC17.86■□□□□ 0.45
PDE6BP35913 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
PDE6BP35913 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms