Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL9A1P20849 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL9A1P20849 RNF170-202ENST00000319073 1265 ntTSL 2 BASIC14.99□□□□□ -0.01
COL9A1P20849 SNORA57-201ENST00000383870 149 ntBASIC14.99□□□□□ -0.01
COL9A1P20849 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL9A1P20849 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
COL9A1P20849 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
COL9A1P20849 OR2A1-AS1-203ENST00000468575 568 ntBASIC14.99□□□□□ -0.01
COL9A1P20849 ALG1L3P-201ENST00000503331 765 ntBASIC14.99□□□□□ -0.01
COL9A1P20849 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC14.99□□□□□ -0.01
COL9A1P20849 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC14.99□□□□□ -0.01
COL9A1P20849 AC002558.2-201ENST00000572193 673 ntTSL 3 BASIC14.99□□□□□ -0.01
COL9A1P20849 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.99□□□□□ -0.01
COL9A1P20849 AC003956.1-201ENST00000598450 356 ntTSL 3 BASIC14.99□□□□□ -0.01
COL9A1P20849 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
COL9A1P20849 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL9A1P20849 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.99□□□□□ -0.01
COL9A1P20849 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
COL9A1P20849 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
COL9A1P20849 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL9A1P20849 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL9A1P20849 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL9A1P20849 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
COL9A1P20849 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
COL9A1P20849 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.99□□□□□ -0.01
COL9A1P20849 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.98□□□□□ -0.01
COL9A1P20849 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
COL9A1P20849 ANXA3-202ENST00000503570 1524 ntTSL 5 BASIC14.98□□□□□ -0.01
COL9A1P20849 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC14.98□□□□□ -0.01
COL9A1P20849 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
COL9A1P20849 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
COL9A1P20849 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 FAM25A-201ENST00000343959 345 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC14.98□□□□□ -0.01
COL9A1P20849 CRCT1-201ENST00000368790 700 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 RN7SKP109-201ENST00000410592 316 ntBASIC14.98□□□□□ -0.01
COL9A1P20849 HNRNPA1P25-201ENST00000422644 937 ntBASIC14.98□□□□□ -0.01
COL9A1P20849 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.98□□□□□ -0.01
COL9A1P20849 HMGA1P2-201ENST00000430198 324 ntBASIC14.98□□□□□ -0.01
COL9A1P20849 FOXP4-AS1-202ENST00000432751 409 ntTSL 2 BASIC14.98□□□□□ -0.01
COL9A1P20849 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC14.98□□□□□ -0.01
COL9A1P20849 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14.98□□□□□ -0.01
COL9A1P20849 AC118282.1-201ENST00000506408 765 ntBASIC14.98□□□□□ -0.01
COL9A1P20849 AC226150.1-201ENST00000544259 466 ntBASIC14.98□□□□□ -0.01
COL9A1P20849 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
COL9A1P20849 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.98□□□□□ -0.01
COL9A1P20849 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.98□□□□□ -0.01
COL9A1P20849 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
COL9A1P20849 AL118556.2-201ENST00000614375 824 ntBASIC14.98□□□□□ -0.01
COL9A1P20849 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC14.98□□□□□ -0.01
COL9A1P20849 PAX6-238ENST00000638755 1161 ntTSL 5 BASIC14.98□□□□□ -0.01
COL9A1P20849 AL357143.1-203ENST00000639750 881 ntBASIC14.98□□□□□ -0.01
COL9A1P20849 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
COL9A1P20849 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.98□□□□□ -0.01
COL9A1P20849 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.98□□□□□ -0.01
COL9A1P20849 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC14.98□□□□□ -0.01
COL9A1P20849 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 AC136759.1-202ENST00000530858 2194 ntBASIC14.98□□□□□ -0.01
COL9A1P20849 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.98□□□□□ -0.01
COL9A1P20849 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 AC136621.1-201ENST00000624017 2304 ntBASIC14.98□□□□□ -0.01
COL9A1P20849 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
COL9A1P20849 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL9A1P20849 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.97□□□□□ -0.01
COL9A1P20849 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.97□□□□□ -0.01
COL9A1P20849 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
COL9A1P20849 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL9A1P20849 AC092809.4-201ENST00000420350 1323 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
COL9A1P20849 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.97□□□□□ -0.01
COL9A1P20849 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.97□□□□□ -0.01
COL9A1P20849 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL9A1P20849 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL9A1P20849 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
COL9A1P20849 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms