Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
TOP1P11387 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 AL035414.1-201ENST00000451327 857 ntBASIC17.29■□□□□ 0.36
TOP1P11387 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.29■□□□□ 0.36
TOP1P11387 RNMTL1P1-201ENST00000454103 560 ntBASIC17.29■□□□□ 0.36
TOP1P11387 SERPINA13P-202ENST00000478994 924 ntBASIC17.29■□□□□ 0.36
TOP1P11387 AC091804.1-201ENST00000486888 567 ntBASIC17.29■□□□□ 0.36
TOP1P11387 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.29■□□□□ 0.36
TOP1P11387 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TOP1P11387 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.29■□□□□ 0.36
TOP1P11387 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 AC005324.6-201ENST00000587972 613 ntBASIC17.29■□□□□ 0.36
TOP1P11387 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.29■□□□□ 0.36
TOP1P11387 BNIP3P13-201ENST00000599968 566 ntBASIC17.29■□□□□ 0.36
TOP1P11387 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.29■□□□□ 0.36
TOP1P11387 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC17.29■□□□□ 0.36
TOP1P11387 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC17.29■□□□□ 0.36
TOP1P11387 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC17.29■□□□□ 0.36
TOP1P11387 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 AC244394.1-201ENST00000435000 1665 ntBASIC17.29■□□□□ 0.36
TOP1P11387 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.29■□□□□ 0.36
TOP1P11387 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TOP1P11387 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC17.29■□□□□ 0.36
TOP1P11387 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC17.28■□□□□ 0.36
TOP1P11387 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC17.28■□□□□ 0.36
TOP1P11387 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.28■□□□□ 0.36
TOP1P11387 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
TOP1P11387 AC018529.2-202ENST00000611482 3087 ntBASIC17.28■□□□□ 0.36
TOP1P11387 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TOP1P11387 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
TOP1P11387 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TOP1P11387 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.28■□□□□ 0.36
TOP1P11387 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TOP1P11387 MVK-217ENST00000639206 367 ntTSL 5 BASIC17.28■□□□□ 0.36
TOP1P11387 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.28■□□□□ 0.36
TOP1P11387 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TOP1P11387 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
TOP1P11387 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TOP1P11387 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TOP1P11387 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.27■□□□□ 0.36
TOP1P11387 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.27■□□□□ 0.36
TOP1P11387 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.27■□□□□ 0.36
TOP1P11387 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC17.27■□□□□ 0.36
TOP1P11387 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TOP1P11387 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.27■□□□□ 0.36
TOP1P11387 KLF2P1-201ENST00000447438 1042 ntBASIC17.27■□□□□ 0.36
TOP1P11387 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 AC044849.1-201ENST00000519737 1188 ntBASIC17.27■□□□□ 0.36
TOP1P11387 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.27■□□□□ 0.36
TOP1P11387 AC103810.3-201ENST00000583567 96 ntBASIC17.27■□□□□ 0.36
TOP1P11387 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC17.27■□□□□ 0.36
TOP1P11387 AL451050.2-201ENST00000606967 682 ntBASIC17.27■□□□□ 0.36
TOP1P11387 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.27■□□□□ 0.36
TOP1P11387 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC17.27■□□□□ 0.36
TOP1P11387 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TOP1P11387 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TOP1P11387 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TOP1P11387 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TOP1P11387 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TOP1P11387 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
TOP1P11387 AMT-239ENST00000636865 1914 ntTSL 5 BASIC17.27■□□□□ 0.35
TOP1P11387 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TOP1P11387 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TOP1P11387 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TOP1P11387 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms