Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBB4AP04350 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBB4AP04350 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBB4AP04350 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TUBB4AP04350 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC15.81■□□□□ 0.12
TUBB4AP04350 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.81■□□□□ 0.12
TUBB4AP04350 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.8■□□□□ 0.12
TUBB4AP04350 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBB4AP04350 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC15.8■□□□□ 0.12
TUBB4AP04350 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TUBB4AP04350 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 AL365181.3-201ENST00000605886 3222 ntBASIC15.8■□□□□ 0.12
TUBB4AP04350 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TUBB4AP04350 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBB4AP04350 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TUBB4AP04350 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TUBB4AP04350 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.8■□□□□ 0.12
TUBB4AP04350 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBB4AP04350 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.8■□□□□ 0.12
TUBB4AP04350 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TUBB4AP04350 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBB4AP04350 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
TUBB4AP04350 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC15.8■□□□□ 0.12
TUBB4AP04350 LINC01115-203ENST00000606068 577 ntBASIC15.8■□□□□ 0.12
TUBB4AP04350 AC006538.3-201ENST00000612495 578 ntBASIC15.8■□□□□ 0.12
TUBB4AP04350 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.8■□□□□ 0.12
TUBB4AP04350 AC105339.1-204ENST00000636249 355 ntBASIC15.8■□□□□ 0.12
TUBB4AP04350 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC15.8■□□□□ 0.12
TUBB4AP04350 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TUBB4AP04350 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBB4AP04350 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
TUBB4AP04350 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC15.8■□□□□ 0.12
TUBB4AP04350 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TUBB4AP04350 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TUBB4AP04350 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC15.79■□□□□ 0.12
TUBB4AP04350 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBB4AP04350 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBB4AP04350 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBB4AP04350 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TUBB4AP04350 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBB4AP04350 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TUBB4AP04350 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBB4AP04350 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBB4AP04350 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBB4AP04350 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBB4AP04350 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBB4AP04350 AL592309.1-201ENST00000443127 649 ntBASIC15.79■□□□□ 0.12
TUBB4AP04350 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.79■□□□□ 0.12
TUBB4AP04350 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.79■□□□□ 0.12
TUBB4AP04350 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBB4AP04350 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBB4AP04350 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBB4AP04350 BAP1-211ENST00000615113 489 ntBASIC15.79■□□□□ 0.12
TUBB4AP04350 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
TUBB4AP04350 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.79■□□□□ 0.12
TUBB4AP04350 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC15.79■□□□□ 0.12
TUBB4AP04350 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBB4AP04350 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TUBB4AP04350 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBB4AP04350 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBB4AP04350 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TUBB4AP04350 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TUBB4AP04350 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBB4AP04350 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBB4AP04350 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC15.79■□□□□ 0.12
TUBB4AP04350 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.79■□□□□ 0.12
TUBB4AP04350 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TUBB4AP04350 AC107375.1-201ENST00000564464 2231 ntBASIC15.79■□□□□ 0.12
TUBB4AP04350 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TUBB4AP04350 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.79■□□□□ 0.12
TUBB4AP04350 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TUBB4AP04350 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBB4AP04350 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TUBB4AP04350 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TUBB4AP04350 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TUBB4AP04350 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms