Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
HMGCRP04035 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HMGCRP04035 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
HMGCRP04035 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HMGCRP04035 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
HMGCRP04035 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HMGCRP04035 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HMGCRP04035 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCRP04035 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 DBET-201ENST00000630918 3363 ntBASIC16.42■□□□□ 0.22
HMGCRP04035 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HMGCRP04035 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCRP04035 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 AC016757.1-202ENST00000409376 892 ntTSL 3 BASIC16.42■□□□□ 0.22
HMGCRP04035 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCRP04035 AQP7P5-201ENST00000428759 1049 ntBASIC16.42■□□□□ 0.22
HMGCRP04035 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCRP04035 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 AQP7P4-201ENST00000447083 1042 ntBASIC16.42■□□□□ 0.22
HMGCRP04035 AQP7P2-201ENST00000453967 1041 ntBASIC16.42■□□□□ 0.22
HMGCRP04035 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCRP04035 FAM86KP-201ENST00000509817 987 ntBASIC16.42■□□□□ 0.22
HMGCRP04035 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.42■□□□□ 0.22
HMGCRP04035 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
HMGCRP04035 AQP7P3-201ENST00000624547 1041 ntBASIC16.42■□□□□ 0.22
HMGCRP04035 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.42■□□□□ 0.22
HMGCRP04035 AC023157.3-201ENST00000619086 2088 ntBASIC16.42■□□□□ 0.22
HMGCRP04035 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.42■□□□□ 0.22
HMGCRP04035 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HMGCRP04035 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCRP04035 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCRP04035 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
HMGCRP04035 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCRP04035 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCRP04035 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCRP04035 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCRP04035 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCRP04035 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGCRP04035 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCRP04035 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.41■□□□□ 0.22
HMGCRP04035 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HMGCRP04035 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCRP04035 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCRP04035 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCRP04035 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.41■□□□□ 0.22
HMGCRP04035 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCRP04035 KRT17P4-201ENST00000429445 819 ntBASIC16.41■□□□□ 0.22
HMGCRP04035 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.41■□□□□ 0.22
HMGCRP04035 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCRP04035 RN7SL277P-201ENST00000481521 288 ntBASIC16.41■□□□□ 0.22
HMGCRP04035 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
HMGCRP04035 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCRP04035 OR5BD1P-201ENST00000532527 817 ntBASIC16.41■□□□□ 0.22
HMGCRP04035 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCRP04035 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC16.41■□□□□ 0.22
HMGCRP04035 AC124068.2-201ENST00000569473 1109 ntBASIC16.41■□□□□ 0.22
HMGCRP04035 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCRP04035 RN7SL357P-201ENST00000581065 298 ntBASIC16.41■□□□□ 0.22
HMGCRP04035 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.41■□□□□ 0.22
HMGCRP04035 AC002044.2-201ENST00000624910 970 ntBASIC16.41■□□□□ 0.22
HMGCRP04035 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HMGCRP04035 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCRP04035 AL590440.2-201ENST00000641973 1595 ntBASIC16.41■□□□□ 0.22
HMGCRP04035 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCRP04035 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCRP04035 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCRP04035 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCRP04035 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGCRP04035 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCRP04035 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCRP04035 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGCRP04035 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HMGCRP04035 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.41■□□□□ 0.22
HMGCRP04035 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HMGCRP04035 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC16.41■□□□□ 0.22
HMGCRP04035 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HMGCRP04035 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.4■□□□□ 0.22
HMGCRP04035 AC023024.2-201ENST00000623561 1993 ntBASIC16.4■□□□□ 0.22
HMGCRP04035 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
HMGCRP04035 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HMGCRP04035 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HMGCRP04035 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.4■□□□□ 0.22
HMGCRP04035 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms