Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC17.08■□□□□ 0.32
CTNND1O60716 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.08■□□□□ 0.32
CTNND1O60716 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CTNND1O60716 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CTNND1O60716 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.08■□□□□ 0.32
CTNND1O60716 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CTNND1O60716 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNND1O60716 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CTNND1O60716 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.07■□□□□ 0.32
CTNND1O60716 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.07■□□□□ 0.32
CTNND1O60716 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTNND1O60716 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTNND1O60716 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CTNND1O60716 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTNND1O60716 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNND1O60716 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
CTNND1O60716 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.07■□□□□ 0.32
CTNND1O60716 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.07■□□□□ 0.32
CTNND1O60716 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNND1O60716 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CTNND1O60716 PGR-210ENST00000619228 3038 ntTSL 5 BASIC17.07■□□□□ 0.32
CTNND1O60716 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC17.07■□□□□ 0.32
CTNND1O60716 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNND1O60716 AL355334.1-201ENST00000417713 215 ntBASIC17.07■□□□□ 0.32
CTNND1O60716 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC17.07■□□□□ 0.32
CTNND1O60716 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC17.07■□□□□ 0.32
CTNND1O60716 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC17.07■□□□□ 0.32
CTNND1O60716 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC17.07■□□□□ 0.32
CTNND1O60716 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC17.07■□□□□ 0.32
CTNND1O60716 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTNND1O60716 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTNND1O60716 DRG2-220ENST00000583355 891 ntTSL 3 BASIC17.07■□□□□ 0.32
CTNND1O60716 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNND1O60716 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC17.07■□□□□ 0.32
CTNND1O60716 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNND1O60716 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTNND1O60716 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTNND1O60716 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CTNND1O60716 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC17.07■□□□□ 0.32
CTNND1O60716 KHSRPP1-201ENST00000427983 1768 ntBASIC17.07■□□□□ 0.32
CTNND1O60716 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNND1O60716 AC006504.5-208ENST00000588784 2401 ntBASIC17.07■□□□□ 0.32
CTNND1O60716 MARK2P16-201ENST00000605714 1723 ntBASIC17.07■□□□□ 0.32
CTNND1O60716 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CTNND1O60716 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CTNND1O60716 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.07■□□□□ 0.32
CTNND1O60716 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CTNND1O60716 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC17.07■□□□□ 0.32
CTNND1O60716 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CTNND1O60716 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.06■□□□□ 0.32
CTNND1O60716 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC17.06■□□□□ 0.32
CTNND1O60716 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.06■□□□□ 0.32
CTNND1O60716 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CTNND1O60716 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CTNND1O60716 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC17.06■□□□□ 0.32
CTNND1O60716 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC17.06■□□□□ 0.32
CTNND1O60716 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC17.06■□□□□ 0.32
CTNND1O60716 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC17.06■□□□□ 0.32
CTNND1O60716 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.06■□□□□ 0.32
CTNND1O60716 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC17.06■□□□□ 0.32
CTNND1O60716 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.06■□□□□ 0.32
CTNND1O60716 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC17.06■□□□□ 0.32
CTNND1O60716 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.06■□□□□ 0.32
CTNND1O60716 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC17.06■□□□□ 0.32
CTNND1O60716 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 CMC2-224ENST00000630396 481 ntTSL 5 BASIC17.06■□□□□ 0.32
CTNND1O60716 AP001184.1-201ENST00000637936 376 ntBASIC17.06■□□□□ 0.32
CTNND1O60716 HLA-C-210ENST00000640219 976 ntBASIC17.06■□□□□ 0.32
CTNND1O60716 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.06■□□□□ 0.32
CTNND1O60716 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTNND1O60716 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CTNND1O60716 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CTNND1O60716 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CTNND1O60716 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.06■□□□□ 0.32
CTNND1O60716 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CTNND1O60716 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms