Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC14.28□□□□□ -0.12
SLC28A2O43868 AC138649.2-201ENST00000615886 705 ntBASIC14.28□□□□□ -0.12
SLC28A2O43868 AC005912.2-201ENST00000619492 2400 ntBASIC14.28□□□□□ -0.12
SLC28A2O43868 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
SLC28A2O43868 AC007191.1-201ENST00000623179 2995 ntBASIC14.28□□□□□ -0.12
SLC28A2O43868 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
SLC28A2O43868 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
SLC28A2O43868 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC28A2O43868 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.28□□□□□ -0.12
SLC28A2O43868 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
SLC28A2O43868 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SLC28A2O43868 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SLC28A2O43868 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
SLC28A2O43868 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.27□□□□□ -0.12
SLC28A2O43868 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
SLC28A2O43868 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC14.27□□□□□ -0.12
SLC28A2O43868 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.27□□□□□ -0.12
SLC28A2O43868 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.27□□□□□ -0.12
SLC28A2O43868 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC28A2O43868 AMT-204ENST00000427987 1646 ntTSL 5 BASIC14.27□□□□□ -0.12
SLC28A2O43868 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC28A2O43868 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC14.27□□□□□ -0.12
SLC28A2O43868 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC28A2O43868 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.27□□□□□ -0.12
SLC28A2O43868 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC28A2O43868 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.27□□□□□ -0.12
SLC28A2O43868 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC28A2O43868 LILRP1-201ENST00000444199 1370 ntBASIC14.27□□□□□ -0.12
SLC28A2O43868 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
SLC28A2O43868 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC28A2O43868 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC28A2O43868 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC28A2O43868 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC28A2O43868 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.27□□□□□ -0.13
SLC28A2O43868 MIR1202-201ENST00000408529 83 ntBASIC14.27□□□□□ -0.13
SLC28A2O43868 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC28A2O43868 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.27□□□□□ -0.13
SLC28A2O43868 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.27□□□□□ -0.13
SLC28A2O43868 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC28A2O43868 AC004066.1-201ENST00000502488 802 ntBASIC14.27□□□□□ -0.13
SLC28A2O43868 AC126915.1-201ENST00000522847 1038 ntBASIC14.27□□□□□ -0.13
SLC28A2O43868 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC28A2O43868 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC28A2O43868 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
SLC28A2O43868 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.27□□□□□ -0.13
SLC28A2O43868 PRKXP1-201ENST00000561423 1122 ntBASIC14.27□□□□□ -0.13
SLC28A2O43868 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
SLC28A2O43868 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SLC28A2O43868 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.27□□□□□ -0.13
SLC28A2O43868 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC28A2O43868 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC28A2O43868 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.27□□□□□ -0.13
SLC28A2O43868 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC14.27□□□□□ -0.13
SLC28A2O43868 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC14.27□□□□□ -0.13
SLC28A2O43868 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.27□□□□□ -0.13
SLC28A2O43868 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC28A2O43868 MTHFR-210ENST00000641407 2387 ntBASIC14.27□□□□□ -0.13
SLC28A2O43868 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC28A2O43868 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC28A2O43868 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SLC28A2O43868 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.27□□□□□ -0.13
SLC28A2O43868 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC28A2O43868 AC018529.2-202ENST00000611482 3087 ntBASIC14.27□□□□□ -0.13
SLC28A2O43868 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC28A2O43868 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC28A2O43868 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
SLC28A2O43868 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC28A2O43868 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC28A2O43868 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC28A2O43868 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
SLC28A2O43868 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
SLC28A2O43868 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.27□□□□□ -0.13
SLC28A2O43868 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
SLC28A2O43868 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.27□□□□□ -0.13
SLC28A2O43868 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.26□□□□□ -0.13
SLC28A2O43868 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC28A2O43868 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
SLC28A2O43868 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC28A2O43868 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
SLC28A2O43868 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A2O43868 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A2O43868 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A2O43868 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
SLC28A2O43868 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.26□□□□□ -0.13
SLC28A2O43868 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A2O43868 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.26□□□□□ -0.13
SLC28A2O43868 AC069218.1-201ENST00000435269 762 ntBASIC14.26□□□□□ -0.13
SLC28A2O43868 POM121L10P-201ENST00000436994 1285 ntBASIC14.26□□□□□ -0.13
SLC28A2O43868 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.26□□□□□ -0.13
SLC28A2O43868 RN7SL11P-201ENST00000471305 293 ntBASIC14.26□□□□□ -0.13
SLC28A2O43868 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
SLC28A2O43868 AC104784.1-201ENST00000473096 294 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms