Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NPIPA2E9PIF3 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 INTS4P1-203ENST00000641008 3683 ntBASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 AC007686.3-201ENST00000619017 3487 ntBASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
NPIPA2E9PIF3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 EID1-202ENST00000560490 584 ntTSL 3 BASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 AC100827.2-201ENST00000563214 1194 ntBASIC13.43□□□□□ -0.26
NPIPA2E9PIF3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms