Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 FTO-214ENST00000636218 2227 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 SHC1P1-201ENST00000425230 1745 ntBASIC10.35□□□□□ -0.75
LINC01546A6NGU7 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 NPTN-IT1-201ENST00000628401 2283 ntBASIC10.35□□□□□ -0.75
LINC01546A6NGU7 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 AC134407.3-201ENST00000624035 2139 ntBASIC10.34□□□□□ -0.75
LINC01546A6NGU7 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 FAM90A11P-201ENST00000518378 2218 ntBASIC10.34□□□□□ -0.75
LINC01546A6NGU7 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 DNMT3B-206ENST00000456297 2315 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 AC009501.1-201ENST00000429952 2069 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 ACTG1P14-201ENST00000446382 1122 ntBASIC10.34□□□□□ -0.75
LINC01546A6NGU7 TIMM8BP1-201ENST00000452384 211 ntBASIC10.34□□□□□ -0.75
LINC01546A6NGU7 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 AC005586.2-201ENST00000563946 837 ntBASIC10.34□□□□□ -0.75
LINC01546A6NGU7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 BX088702.1-201ENST00000610784 235 ntBASIC10.34□□□□□ -0.75
LINC01546A6NGU7 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 TNFSF8-201ENST00000223795 1906 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
LINC01546A6NGU7 AC138969.2-201ENST00000532739 9932 ntBASIC10.33□□□□□ -0.75
LINC01546A6NGU7 CETN4P-206ENST00000642099 2168 ntBASIC10.33□□□□□ -0.76
LINC01546A6NGU7 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
LINC01546A6NGU7 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms