Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC27.17■■□□□ 1.94
DDX49Q9Y6V7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
DDX49Q9Y6V7 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
DDX49Q9Y6V7 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
DDX49Q9Y6V7 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
DDX49Q9Y6V7 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC27.16■■□□□ 1.94
DDX49Q9Y6V7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
DDX49Q9Y6V7 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
DDX49Q9Y6V7 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC27.16■■□□□ 1.94
DDX49Q9Y6V7 UNC93B8-201ENST00000511903 705 ntBASIC27.16■■□□□ 1.94
DDX49Q9Y6V7 GRAMD4P7-201ENST00000578182 1232 ntBASIC27.16■■□□□ 1.94
DDX49Q9Y6V7 MIR4787-201ENST00000607364 84 ntBASIC27.16■■□□□ 1.94
DDX49Q9Y6V7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
DDX49Q9Y6V7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
DDX49Q9Y6V7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
DDX49Q9Y6V7 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC27.16■■□□□ 1.94
DDX49Q9Y6V7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
DDX49Q9Y6V7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC27.16■■□□□ 1.94
DDX49Q9Y6V7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC27.15■■□□□ 1.94
DDX49Q9Y6V7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC27.15■■□□□ 1.94
DDX49Q9Y6V7 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.15■■□□□ 1.94
DDX49Q9Y6V7 KRT18P24-201ENST00000344739 1156 ntBASIC27.15■■□□□ 1.94
DDX49Q9Y6V7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
DDX49Q9Y6V7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
DDX49Q9Y6V7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC27.14■■□□□ 1.94
DDX49Q9Y6V7 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
DDX49Q9Y6V7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC27.14■■□□□ 1.94
DDX49Q9Y6V7 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
DDX49Q9Y6V7 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC27.14■■□□□ 1.94
DDX49Q9Y6V7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.14■■□□□ 1.94
DDX49Q9Y6V7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.14■■□□□ 1.94
DDX49Q9Y6V7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
DDX49Q9Y6V7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
DDX49Q9Y6V7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
DDX49Q9Y6V7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
DDX49Q9Y6V7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
DDX49Q9Y6V7 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
DDX49Q9Y6V7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
DDX49Q9Y6V7 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC27.13■■□□□ 1.93
DDX49Q9Y6V7 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
DDX49Q9Y6V7 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
DDX49Q9Y6V7 AC022616.5-201ENST00000518796 181 ntBASIC27.12■■□□□ 1.93
DDX49Q9Y6V7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
DDX49Q9Y6V7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
DDX49Q9Y6V7 NFE2L3P1-201ENST00000588207 1959 ntBASIC27.11■■□□□ 1.93
DDX49Q9Y6V7 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
DDX49Q9Y6V7 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC27.11■■□□□ 1.93
DDX49Q9Y6V7 KRT18P10-201ENST00000388836 1287 ntBASIC27.11■■□□□ 1.93
DDX49Q9Y6V7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
DDX49Q9Y6V7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.11■■□□□ 1.93
DDX49Q9Y6V7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC27.11■■□□□ 1.93
DDX49Q9Y6V7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.11■■□□□ 1.93
DDX49Q9Y6V7 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
DDX49Q9Y6V7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
DDX49Q9Y6V7 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
DDX49Q9Y6V7 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
DDX49Q9Y6V7 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
DDX49Q9Y6V7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
DDX49Q9Y6V7 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.1■■□□□ 1.93
DDX49Q9Y6V7 BX664725.1-201ENST00000438252 379 ntBASIC27.1■■□□□ 1.93
DDX49Q9Y6V7 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
DDX49Q9Y6V7 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC27.1■■□□□ 1.93
DDX49Q9Y6V7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
DDX49Q9Y6V7 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX49Q9Y6V7 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX49Q9Y6V7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX49Q9Y6V7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX49Q9Y6V7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX49Q9Y6V7 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
DDX49Q9Y6V7 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
DDX49Q9Y6V7 KRT125P-201ENST00000546827 989 ntBASIC27.09■■□□□ 1.93
DDX49Q9Y6V7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC27.09■■□□□ 1.93
DDX49Q9Y6V7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
DDX49Q9Y6V7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC27.09■■□□□ 1.93
DDX49Q9Y6V7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC27.09■■□□□ 1.93
DDX49Q9Y6V7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC27.08■■□□□ 1.93
DDX49Q9Y6V7 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC27.08■■□□□ 1.93
DDX49Q9Y6V7 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
DDX49Q9Y6V7 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
DDX49Q9Y6V7 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
DDX49Q9Y6V7 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
DDX49Q9Y6V7 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC27.08■■□□□ 1.92
DDX49Q9Y6V7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC27.07■■□□□ 1.92
DDX49Q9Y6V7 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
DDX49Q9Y6V7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC27.07■■□□□ 1.92
DDX49Q9Y6V7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
DDX49Q9Y6V7 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC27.07■■□□□ 1.92
DDX49Q9Y6V7 TSPY9P-201ENST00000440215 945 ntBASIC27.07■■□□□ 1.92
DDX49Q9Y6V7 TSPY11P-201ENST00000442607 1045 ntBASIC27.07■■□□□ 1.92
DDX49Q9Y6V7 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC27.07■■□□□ 1.92
DDX49Q9Y6V7 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC27.07■■□□□ 1.92
DDX49Q9Y6V7 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
DDX49Q9Y6V7 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
DDX49Q9Y6V7 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
DDX49Q9Y6V7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
DDX49Q9Y6V7 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
DDX49Q9Y6V7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
DDX49Q9Y6V7 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC27.06■■□□□ 1.92
DDX49Q9Y6V7 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC27.06■■□□□ 1.92
DDX49Q9Y6V7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms