Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC35.02■■■■□ 3.2
CDC42BPBQ9Y5S2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
CDC42BPBQ9Y5S2 AL022069.1-201ENST00000568025 1636 ntBASIC35.02■■■■□ 3.2
CDC42BPBQ9Y5S2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC35.02■■■■□ 3.2
CDC42BPBQ9Y5S2 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC35.02■■■■□ 3.2
CDC42BPBQ9Y5S2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
CDC42BPBQ9Y5S2 AC027612.3-201ENST00000413684 1047 ntBASIC35.02■■■■□ 3.2
CDC42BPBQ9Y5S2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC35.02■■■■□ 3.2
CDC42BPBQ9Y5S2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC35.01■■■■□ 3.2
CDC42BPBQ9Y5S2 MIR3181-201ENST00000578512 73 ntBASIC35.01■■■■□ 3.2
CDC42BPBQ9Y5S2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
CDC42BPBQ9Y5S2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.2
CDC42BPBQ9Y5S2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC35.01■■■■□ 3.19
CDC42BPBQ9Y5S2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
CDC42BPBQ9Y5S2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC35.01■■■■□ 3.19
CDC42BPBQ9Y5S2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
CDC42BPBQ9Y5S2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC35.01■■■■□ 3.19
CDC42BPBQ9Y5S2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC35■■■■□ 3.19
CDC42BPBQ9Y5S2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC35■■■■□ 3.19
CDC42BPBQ9Y5S2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC35■■■■□ 3.19
CDC42BPBQ9Y5S2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 DUX4L2-201ENST00000561772 1275 ntBASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 AC092437.1-201ENST00000624794 1048 ntBASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 DUX4L6-201ENST00000626483 1275 ntBASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 DUX4L1-201ENST00000627662 1275 ntBASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 DUX4L8-201ENST00000629013 1275 ntBASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 DUX4L3-201ENST00000630187 1275 ntBASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 DUX4L7-201ENST00000630678 1275 ntBASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 DUX4L5-201ENST00000630834 1275 ntBASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 USF2-207ENST00000595068 1612 ntTSL 5 BASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC34.99■■■■□ 3.19
CDC42BPBQ9Y5S2 AK1-201ENST00000223836 736 ntTSL 3 BASIC34.98■■■■□ 3.19
CDC42BPBQ9Y5S2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC34.98■■■■□ 3.19
CDC42BPBQ9Y5S2 GLI3-203ENST00000437480 451 ntTSL 2 BASIC34.98■■■■□ 3.19
CDC42BPBQ9Y5S2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC34.98■■■■□ 3.19
CDC42BPBQ9Y5S2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC34.98■■■■□ 3.19
CDC42BPBQ9Y5S2 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC34.97■■■■□ 3.19
CDC42BPBQ9Y5S2 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC34.97■■■■□ 3.19
CDC42BPBQ9Y5S2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC34.97■■■■□ 3.19
CDC42BPBQ9Y5S2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC34.96■■■■□ 3.19
CDC42BPBQ9Y5S2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC34.96■■■■□ 3.19
CDC42BPBQ9Y5S2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
CDC42BPBQ9Y5S2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC34.96■■■■□ 3.19
CDC42BPBQ9Y5S2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC34.96■■■■□ 3.19
CDC42BPBQ9Y5S2 RARRES2P11-201ENST00000635158 484 ntBASIC34.96■■■■□ 3.19
CDC42BPBQ9Y5S2 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC34.96■■■■□ 3.19
CDC42BPBQ9Y5S2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC34.95■■■■□ 3.19
CDC42BPBQ9Y5S2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC34.95■■■■□ 3.19
CDC42BPBQ9Y5S2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.18
CDC42BPBQ9Y5S2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC34.95■■■■□ 3.18
CDC42BPBQ9Y5S2 AL121749.1-202ENST00000609313 2153 ntBASIC34.94■■■■□ 3.18
CDC42BPBQ9Y5S2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC34.94■■■■□ 3.18
CDC42BPBQ9Y5S2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC34.94■■■■□ 3.18
CDC42BPBQ9Y5S2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC34.94■■■■□ 3.18
CDC42BPBQ9Y5S2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
CDC42BPBQ9Y5S2 DUSP8P4-201ENST00000399538 1761 ntBASIC34.93■■■■□ 3.18
CDC42BPBQ9Y5S2 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
CDC42BPBQ9Y5S2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC34.93■■■■□ 3.18
CDC42BPBQ9Y5S2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC34.93■■■■□ 3.18
CDC42BPBQ9Y5S2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
CDC42BPBQ9Y5S2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC34.92■■■■□ 3.18
CDC42BPBQ9Y5S2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC34.92■■■■□ 3.18
CDC42BPBQ9Y5S2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC34.92■■■■□ 3.18
CDC42BPBQ9Y5S2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC34.92■■■■□ 3.18
CDC42BPBQ9Y5S2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC34.92■■■■□ 3.18
CDC42BPBQ9Y5S2 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC34.92■■■■□ 3.18
CDC42BPBQ9Y5S2 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC34.92■■■■□ 3.18
CDC42BPBQ9Y5S2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC34.92■■■■□ 3.18
CDC42BPBQ9Y5S2 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC34.91■■■■□ 3.18
CDC42BPBQ9Y5S2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC34.91■■■■□ 3.18
CDC42BPBQ9Y5S2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC34.91■■■■□ 3.18
CDC42BPBQ9Y5S2 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC34.91■■■■□ 3.18
CDC42BPBQ9Y5S2 GRAMD4P2-201ENST00000423297 1097 ntBASIC34.91■■■■□ 3.18
CDC42BPBQ9Y5S2 YBX1P1-201ENST00000445822 960 ntBASIC34.91■■■■□ 3.18
CDC42BPBQ9Y5S2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC34.91■■■■□ 3.18
CDC42BPBQ9Y5S2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC34.9■■■■□ 3.18
CDC42BPBQ9Y5S2 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
CDC42BPBQ9Y5S2 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CDC42BPBQ9Y5S2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CDC42BPBQ9Y5S2 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC34.9■■■■□ 3.18
CDC42BPBQ9Y5S2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CDC42BPBQ9Y5S2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CDC42BPBQ9Y5S2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC34.89■■■■□ 3.18
CDC42BPBQ9Y5S2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC34.89■■■■□ 3.18
CDC42BPBQ9Y5S2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC34.89■■■■□ 3.18
CDC42BPBQ9Y5S2 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CDC42BPBQ9Y5S2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CDC42BPBQ9Y5S2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC34.89■■■■□ 3.18
CDC42BPBQ9Y5S2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC34.89■■■■□ 3.18
CDC42BPBQ9Y5S2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CDC42BPBQ9Y5S2 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC34.88■■■■□ 3.17
CDC42BPBQ9Y5S2 AC012414.1-201ENST00000556676 535 ntBASIC34.88■■■■□ 3.17
CDC42BPBQ9Y5S2 RAB43-208ENST00000615093 783 ntTSL 5 BASIC34.88■■■■□ 3.17
CDC42BPBQ9Y5S2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC34.88■■■■□ 3.17
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms