Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPS3Q9UNS2 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPS3Q9UNS2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
COPS3Q9UNS2 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPS3Q9UNS2 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COPS3Q9UNS2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.25■□□□□ 0.83
COPS3Q9UNS2 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPS3Q9UNS2 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.24■□□□□ 0.83
COPS3Q9UNS2 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPS3Q9UNS2 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COPS3Q9UNS2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPS3Q9UNS2 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
COPS3Q9UNS2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
COPS3Q9UNS2 AL161729.1-201ENST00000604104 1402 ntBASIC20.24■□□□□ 0.83
COPS3Q9UNS2 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COPS3Q9UNS2 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPS3Q9UNS2 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC20.24■□□□□ 0.83
COPS3Q9UNS2 AC092068.2-201ENST00000590491 1708 ntBASIC20.24■□□□□ 0.83
COPS3Q9UNS2 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
COPS3Q9UNS2 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COPS3Q9UNS2 DUSP8P3-201ENST00000399571 1760 ntBASIC20.23■□□□□ 0.83
COPS3Q9UNS2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COPS3Q9UNS2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COPS3Q9UNS2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPS3Q9UNS2 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPS3Q9UNS2 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPS3Q9UNS2 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.23■□□□□ 0.83
COPS3Q9UNS2 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPS3Q9UNS2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
COPS3Q9UNS2 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPS3Q9UNS2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.23■□□□□ 0.83
COPS3Q9UNS2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COPS3Q9UNS2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COPS3Q9UNS2 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.22■□□□□ 0.83
COPS3Q9UNS2 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COPS3Q9UNS2 LONRF2P2-201ENST00000439212 571 ntBASIC20.22■□□□□ 0.83
COPS3Q9UNS2 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COPS3Q9UNS2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COPS3Q9UNS2 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COPS3Q9UNS2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.22■□□□□ 0.83
COPS3Q9UNS2 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
COPS3Q9UNS2 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COPS3Q9UNS2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPS3Q9UNS2 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COPS3Q9UNS2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPS3Q9UNS2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPS3Q9UNS2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPS3Q9UNS2 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
COPS3Q9UNS2 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
COPS3Q9UNS2 U85056.1-201ENST00000616429 682 ntBASIC20.2■□□□□ 0.82
COPS3Q9UNS2 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPS3Q9UNS2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
COPS3Q9UNS2 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.19■□□□□ 0.82
COPS3Q9UNS2 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPS3Q9UNS2 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPS3Q9UNS2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPS3Q9UNS2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPS3Q9UNS2 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC20.19■□□□□ 0.82
COPS3Q9UNS2 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.19■□□□□ 0.82
COPS3Q9UNS2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPS3Q9UNS2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
COPS3Q9UNS2 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPS3Q9UNS2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPS3Q9UNS2 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COPS3Q9UNS2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
COPS3Q9UNS2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPS3Q9UNS2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPS3Q9UNS2 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
COPS3Q9UNS2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
COPS3Q9UNS2 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPS3Q9UNS2 RARRES2P2-201ENST00000394842 485 ntBASIC20.18■□□□□ 0.82
COPS3Q9UNS2 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.18■□□□□ 0.82
COPS3Q9UNS2 AC129492.7-201ENST00000622992 756 ntBASIC20.18■□□□□ 0.82
COPS3Q9UNS2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPS3Q9UNS2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPS3Q9UNS2 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
COPS3Q9UNS2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
COPS3Q9UNS2 AC233723.2-201ENST00000623798 2106 ntBASIC20.18■□□□□ 0.82
COPS3Q9UNS2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPS3Q9UNS2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
COPS3Q9UNS2 AL117328.2-201ENST00000624617 1940 ntBASIC20.17■□□□□ 0.82
COPS3Q9UNS2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPS3Q9UNS2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPS3Q9UNS2 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPS3Q9UNS2 AL022069.1-201ENST00000568025 1636 ntBASIC20.17■□□□□ 0.82
COPS3Q9UNS2 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPS3Q9UNS2 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPS3Q9UNS2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COPS3Q9UNS2 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.17■□□□□ 0.82
COPS3Q9UNS2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
COPS3Q9UNS2 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.17■□□□□ 0.82
COPS3Q9UNS2 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.17■□□□□ 0.82
COPS3Q9UNS2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
COPS3Q9UNS2 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
COPS3Q9UNS2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPS3Q9UNS2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
COPS3Q9UNS2 C1orf229-201ENST00000623686 2258 ntBASIC20.16■□□□□ 0.82
COPS3Q9UNS2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COPS3Q9UNS2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
COPS3Q9UNS2 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms