Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC24.57■■□□□ 1.52
UBQLN1Q9UMX0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC24.57■■□□□ 1.52
UBQLN1Q9UMX0 AC141586.4-201ENST00000624558 1573 ntBASIC24.57■■□□□ 1.52
UBQLN1Q9UMX0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
UBQLN1Q9UMX0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.57■■□□□ 1.52
UBQLN1Q9UMX0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
UBQLN1Q9UMX0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
UBQLN1Q9UMX0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.56■■□□□ 1.52
UBQLN1Q9UMX0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
UBQLN1Q9UMX0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
UBQLN1Q9UMX0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC24.55■■□□□ 1.52
UBQLN1Q9UMX0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
UBQLN1Q9UMX0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 AL139125.2-201ENST00000623134 1869 ntBASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 SRD5A1P1-201ENST00000442297 786 ntBASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 GATM-206ENST00000558336 1522 ntTSL 2 BASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC24.54■■□□□ 1.52
UBQLN1Q9UMX0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
UBQLN1Q9UMX0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
UBQLN1Q9UMX0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
UBQLN1Q9UMX0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
UBQLN1Q9UMX0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
UBQLN1Q9UMX0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC24.53■■□□□ 1.52
UBQLN1Q9UMX0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
UBQLN1Q9UMX0 LINC00543-201ENST00000567234 1845 ntBASIC24.53■■□□□ 1.52
UBQLN1Q9UMX0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.53■■□□□ 1.52
UBQLN1Q9UMX0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC24.53■■□□□ 1.52
UBQLN1Q9UMX0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
UBQLN1Q9UMX0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
UBQLN1Q9UMX0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC24.53■■□□□ 1.52
UBQLN1Q9UMX0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
UBQLN1Q9UMX0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC24.52■■□□□ 1.52
UBQLN1Q9UMX0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
UBQLN1Q9UMX0 LINC01124-201ENST00000409786 2117 ntBASIC24.52■■□□□ 1.52
UBQLN1Q9UMX0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
UBQLN1Q9UMX0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
UBQLN1Q9UMX0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
UBQLN1Q9UMX0 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC24.52■■□□□ 1.52
UBQLN1Q9UMX0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC24.52■■□□□ 1.52
UBQLN1Q9UMX0 AC009102.2-201ENST00000606772 1639 ntBASIC24.52■■□□□ 1.52
UBQLN1Q9UMX0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
UBQLN1Q9UMX0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC24.52■■□□□ 1.52
UBQLN1Q9UMX0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
UBQLN1Q9UMX0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC24.51■■□□□ 1.51
UBQLN1Q9UMX0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC24.51■■□□□ 1.51
UBQLN1Q9UMX0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
UBQLN1Q9UMX0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.51■■□□□ 1.51
UBQLN1Q9UMX0 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
UBQLN1Q9UMX0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
UBQLN1Q9UMX0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
UBQLN1Q9UMX0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
UBQLN1Q9UMX0 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
UBQLN1Q9UMX0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
UBQLN1Q9UMX0 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC24.5■■□□□ 1.51
UBQLN1Q9UMX0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC24.5■■□□□ 1.51
UBQLN1Q9UMX0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC24.5■■□□□ 1.51
UBQLN1Q9UMX0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
UBQLN1Q9UMX0 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC24.5■■□□□ 1.51
UBQLN1Q9UMX0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
UBQLN1Q9UMX0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
UBQLN1Q9UMX0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
UBQLN1Q9UMX0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC24.49■■□□□ 1.51
UBQLN1Q9UMX0 NALT1-201ENST00000429224 738 ntTSL 5 BASIC24.49■■□□□ 1.51
UBQLN1Q9UMX0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC24.49■■□□□ 1.51
UBQLN1Q9UMX0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
UBQLN1Q9UMX0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
UBQLN1Q9UMX0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
UBQLN1Q9UMX0 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC24.48■■□□□ 1.51
UBQLN1Q9UMX0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC24.48■■□□□ 1.51
UBQLN1Q9UMX0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
UBQLN1Q9UMX0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
UBQLN1Q9UMX0 AL139246.5-201ENST00000606645 996 ntBASIC24.48■■□□□ 1.51
UBQLN1Q9UMX0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC24.48■■□□□ 1.51
UBQLN1Q9UMX0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
UBQLN1Q9UMX0 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.47■■□□□ 1.51
UBQLN1Q9UMX0 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
UBQLN1Q9UMX0 AC096631.2-201ENST00000436136 790 ntBASIC24.47■■□□□ 1.51
UBQLN1Q9UMX0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC24.47■■□□□ 1.51
UBQLN1Q9UMX0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
UBQLN1Q9UMX0 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC24.47■■□□□ 1.51
UBQLN1Q9UMX0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
UBQLN1Q9UMX0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC24.47■■□□□ 1.51
UBQLN1Q9UMX0 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
UBQLN1Q9UMX0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
UBQLN1Q9UMX0 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
UBQLN1Q9UMX0 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC24.46■■□□□ 1.51
UBQLN1Q9UMX0 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
UBQLN1Q9UMX0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC24.46■■□□□ 1.51
UBQLN1Q9UMX0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms