Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
HPF1Q9NWY4 AC138932.3-201ENST00000567634 1902 ntBASIC21.06■□□□□ 0.96
HPF1Q9NWY4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
HPF1Q9NWY4 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HPF1Q9NWY4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.06■□□□□ 0.96
HPF1Q9NWY4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HPF1Q9NWY4 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HPF1Q9NWY4 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HPF1Q9NWY4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HPF1Q9NWY4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.06■□□□□ 0.96
HPF1Q9NWY4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
HPF1Q9NWY4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC21.06■□□□□ 0.96
HPF1Q9NWY4 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.06■□□□□ 0.96
HPF1Q9NWY4 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HPF1Q9NWY4 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.06■□□□□ 0.96
HPF1Q9NWY4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.05■□□□□ 0.96
HPF1Q9NWY4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HPF1Q9NWY4 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HPF1Q9NWY4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HPF1Q9NWY4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
HPF1Q9NWY4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HPF1Q9NWY4 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC21.05■□□□□ 0.96
HPF1Q9NWY4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.05■□□□□ 0.96
HPF1Q9NWY4 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
HPF1Q9NWY4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HPF1Q9NWY4 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.05■□□□□ 0.96
HPF1Q9NWY4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
HPF1Q9NWY4 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HPF1Q9NWY4 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HPF1Q9NWY4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.04■□□□□ 0.96
HPF1Q9NWY4 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC21.04■□□□□ 0.96
HPF1Q9NWY4 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.04■□□□□ 0.96
HPF1Q9NWY4 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HPF1Q9NWY4 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
HPF1Q9NWY4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.04■□□□□ 0.96
HPF1Q9NWY4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HPF1Q9NWY4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
HPF1Q9NWY4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
HPF1Q9NWY4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.04■□□□□ 0.96
HPF1Q9NWY4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.03■□□□□ 0.96
HPF1Q9NWY4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HPF1Q9NWY4 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HPF1Q9NWY4 AL512631.2-201ENST00000604634 923 ntBASIC21.03■□□□□ 0.96
HPF1Q9NWY4 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
HPF1Q9NWY4 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
HPF1Q9NWY4 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HPF1Q9NWY4 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
HPF1Q9NWY4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
HPF1Q9NWY4 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.02■□□□□ 0.96
HPF1Q9NWY4 MIR4466-201ENST00000606121 54 ntBASIC21.02■□□□□ 0.96
HPF1Q9NWY4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HPF1Q9NWY4 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
HPF1Q9NWY4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
HPF1Q9NWY4 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HPF1Q9NWY4 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
HPF1Q9NWY4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HPF1Q9NWY4 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
HPF1Q9NWY4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HPF1Q9NWY4 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
HPF1Q9NWY4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
HPF1Q9NWY4 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
HPF1Q9NWY4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21■□□□□ 0.95
HPF1Q9NWY4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HPF1Q9NWY4 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
HPF1Q9NWY4 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
HPF1Q9NWY4 RASSF1-AS1-201ENST00000629828 790 ntBASIC21■□□□□ 0.95
HPF1Q9NWY4 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
HPF1Q9NWY4 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPF1Q9NWY4 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPF1Q9NWY4 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPF1Q9NWY4 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
HPF1Q9NWY4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.99■□□□□ 0.95
HPF1Q9NWY4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
HPF1Q9NWY4 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
HPF1Q9NWY4 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
HPF1Q9NWY4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
HPF1Q9NWY4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
HPF1Q9NWY4 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
HPF1Q9NWY4 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.98■□□□□ 0.95
HPF1Q9NWY4 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
HPF1Q9NWY4 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.98■□□□□ 0.95
HPF1Q9NWY4 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HPF1Q9NWY4 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HPF1Q9NWY4 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
HPF1Q9NWY4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.98■□□□□ 0.95
HPF1Q9NWY4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
HPF1Q9NWY4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.97■□□□□ 0.95
HPF1Q9NWY4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
HPF1Q9NWY4 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.97■□□□□ 0.95
HPF1Q9NWY4 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
HPF1Q9NWY4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HPF1Q9NWY4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
HPF1Q9NWY4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.97■□□□□ 0.95
HPF1Q9NWY4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC20.96■□□□□ 0.95
HPF1Q9NWY4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
HPF1Q9NWY4 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
HPF1Q9NWY4 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC20.96■□□□□ 0.95
HPF1Q9NWY4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HPF1Q9NWY4 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HPF1Q9NWY4 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms