Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AL161729.1-201ENST00000604104 1402 ntBASIC18.84■□□□□ 0.61
LIN7CQ9NUP9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN7CQ9NUP9 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN7CQ9NUP9 IDNK-201ENST00000376417 511 ntTSL 5 BASIC18.84■□□□□ 0.61
LIN7CQ9NUP9 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN7CQ9NUP9 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC18.84■□□□□ 0.61
LIN7CQ9NUP9 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC18.84■□□□□ 0.61
LIN7CQ9NUP9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN7CQ9NUP9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN7CQ9NUP9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LIN7CQ9NUP9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LIN7CQ9NUP9 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LIN7CQ9NUP9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
LIN7CQ9NUP9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LIN7CQ9NUP9 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LIN7CQ9NUP9 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LIN7CQ9NUP9 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
LIN7CQ9NUP9 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
LIN7CQ9NUP9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
LIN7CQ9NUP9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.83■□□□□ 0.6
LIN7CQ9NUP9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LIN7CQ9NUP9 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LIN7CQ9NUP9 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
LIN7CQ9NUP9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 BEX3-202ENST00000372634 753 ntTSL 2 BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 AC022616.5-201ENST00000518796 181 ntBASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.81■□□□□ 0.6
LIN7CQ9NUP9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 C9orf163-202ENST00000624034 2573 ntBASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 AL592295.1-201ENST00000400984 884 ntBASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 AC090877.2-201ENST00000558441 1738 ntBASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
LIN7CQ9NUP9 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC18.79■□□□□ 0.6
LIN7CQ9NUP9 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LIN7CQ9NUP9 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LIN7CQ9NUP9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LIN7CQ9NUP9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC18.79■□□□□ 0.6
LIN7CQ9NUP9 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LIN7CQ9NUP9 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LIN7CQ9NUP9 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.78■□□□□ 0.6
LIN7CQ9NUP9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LIN7CQ9NUP9 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LIN7CQ9NUP9 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
LIN7CQ9NUP9 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LIN7CQ9NUP9 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC18.78■□□□□ 0.6
LIN7CQ9NUP9 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LIN7CQ9NUP9 MIR4508-201ENST00000584178 70 ntBASIC18.78■□□□□ 0.6
LIN7CQ9NUP9 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.78■□□□□ 0.6
LIN7CQ9NUP9 PVT1_1.1-201ENST00000615125 194 ntBASIC18.78■□□□□ 0.6
LIN7CQ9NUP9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LIN7CQ9NUP9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.78■□□□□ 0.6
LIN7CQ9NUP9 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LIN7CQ9NUP9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.77■□□□□ 0.6
LIN7CQ9NUP9 YBX1P4-201ENST00000392794 808 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms