Protein–RNA interactions for Protein: Q9NRQ5

SMCO4, Single-pass membrane and coiled-coil domain-containing protein 4, humanhuman

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4Q9NRQ5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
SMCO4Q9NRQ5 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.96■□□□□ 0.47
SMCO4Q9NRQ5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMCO4Q9NRQ5 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC17.96■□□□□ 0.47
SMCO4Q9NRQ5 MXD3-201ENST00000423571 1534 ntTSL 2 BASIC17.96■□□□□ 0.47
SMCO4Q9NRQ5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.96■□□□□ 0.47
SMCO4Q9NRQ5 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
SMCO4Q9NRQ5 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC17.96■□□□□ 0.47
SMCO4Q9NRQ5 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
SMCO4Q9NRQ5 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.96■□□□□ 0.47
SMCO4Q9NRQ5 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SMCO4Q9NRQ5 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
SMCO4Q9NRQ5 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
SMCO4Q9NRQ5 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMCO4Q9NRQ5 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMCO4Q9NRQ5 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMCO4Q9NRQ5 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.95■□□□□ 0.46
SMCO4Q9NRQ5 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMCO4Q9NRQ5 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMCO4Q9NRQ5 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
SMCO4Q9NRQ5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
SMCO4Q9NRQ5 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
SMCO4Q9NRQ5 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
SMCO4Q9NRQ5 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMCO4Q9NRQ5 AL391422.3-201ENST00000603791 2761 ntBASIC17.94■□□□□ 0.46
SMCO4Q9NRQ5 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMCO4Q9NRQ5 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
SMCO4Q9NRQ5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMCO4Q9NRQ5 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
SMCO4Q9NRQ5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
SMCO4Q9NRQ5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMCO4Q9NRQ5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.93■□□□□ 0.46
SMCO4Q9NRQ5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMCO4Q9NRQ5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMCO4Q9NRQ5 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMCO4Q9NRQ5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
SMCO4Q9NRQ5 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMCO4Q9NRQ5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMCO4Q9NRQ5 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
SMCO4Q9NRQ5 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMCO4Q9NRQ5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMCO4Q9NRQ5 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMCO4Q9NRQ5 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SMCO4Q9NRQ5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMCO4Q9NRQ5 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SMCO4Q9NRQ5 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMCO4Q9NRQ5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMCO4Q9NRQ5 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC17.92■□□□□ 0.46
SMCO4Q9NRQ5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMCO4Q9NRQ5 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMCO4Q9NRQ5 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMCO4Q9NRQ5 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMCO4Q9NRQ5 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMCO4Q9NRQ5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMCO4Q9NRQ5 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMCO4Q9NRQ5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMCO4Q9NRQ5 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMCO4Q9NRQ5 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SMCO4Q9NRQ5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMCO4Q9NRQ5 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMCO4Q9NRQ5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMCO4Q9NRQ5 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMCO4Q9NRQ5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMCO4Q9NRQ5 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMCO4Q9NRQ5 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMCO4Q9NRQ5 DYNLL1-208ENST00000550178 581 ntBASIC17.91■□□□□ 0.46
SMCO4Q9NRQ5 AC006077.2-201ENST00000623591 457 ntBASIC17.91■□□□□ 0.46
SMCO4Q9NRQ5 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMCO4Q9NRQ5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMCO4Q9NRQ5 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
SMCO4Q9NRQ5 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMCO4Q9NRQ5 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.91■□□□□ 0.46
SMCO4Q9NRQ5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMCO4Q9NRQ5 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.9■□□□□ 0.46
SMCO4Q9NRQ5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMCO4Q9NRQ5 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
SMCO4Q9NRQ5 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC17.9■□□□□ 0.46
SMCO4Q9NRQ5 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMCO4Q9NRQ5 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMCO4Q9NRQ5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
SMCO4Q9NRQ5 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMCO4Q9NRQ5 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.9■□□□□ 0.46
SMCO4Q9NRQ5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.9■□□□□ 0.46
SMCO4Q9NRQ5 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
SMCO4Q9NRQ5 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMCO4Q9NRQ5 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMCO4Q9NRQ5 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMCO4Q9NRQ5 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMCO4Q9NRQ5 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.89■□□□□ 0.45
SMCO4Q9NRQ5 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.89■□□□□ 0.45
SMCO4Q9NRQ5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMCO4Q9NRQ5 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMCO4Q9NRQ5 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SMCO4Q9NRQ5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.89■□□□□ 0.45
SMCO4Q9NRQ5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
SMCO4Q9NRQ5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SMCO4Q9NRQ5 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC17.88■□□□□ 0.45
SMCO4Q9NRQ5 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SMCO4Q9NRQ5 AC007952.6-201ENST00000573168 2673 ntBASIC17.88■□□□□ 0.45
SMCO4Q9NRQ5 AC003957.1-201ENST00000625108 2673 ntBASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms