Protein–RNA interactions for Protein: Q9HCX3

ZNF304, Zinc finger protein 304, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF304Q9HCX3 RASSF1-AS1-201ENST00000629828 790 ntBASIC21.61■■□□□ 1.05
ZNF304Q9HCX3 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
ZNF304Q9HCX3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.6■■□□□ 1.05
ZNF304Q9HCX3 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.6■■□□□ 1.05
ZNF304Q9HCX3 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.6■■□□□ 1.05
ZNF304Q9HCX3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF304Q9HCX3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF304Q9HCX3 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF304Q9HCX3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ZNF304Q9HCX3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF304Q9HCX3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF304Q9HCX3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
ZNF304Q9HCX3 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.59■■□□□ 1.05
ZNF304Q9HCX3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ZNF304Q9HCX3 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF304Q9HCX3 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ZNF304Q9HCX3 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
ZNF304Q9HCX3 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.59■■□□□ 1.05
ZNF304Q9HCX3 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
ZNF304Q9HCX3 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
ZNF304Q9HCX3 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
ZNF304Q9HCX3 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF304Q9HCX3 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF304Q9HCX3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.58■■□□□ 1.05
ZNF304Q9HCX3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF304Q9HCX3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
ZNF304Q9HCX3 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF304Q9HCX3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
ZNF304Q9HCX3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ZNF304Q9HCX3 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ZNF304Q9HCX3 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.58■■□□□ 1.04
ZNF304Q9HCX3 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
ZNF304Q9HCX3 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF304Q9HCX3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF304Q9HCX3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF304Q9HCX3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
ZNF304Q9HCX3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ZNF304Q9HCX3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.57■■□□□ 1.04
ZNF304Q9HCX3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF304Q9HCX3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ZNF304Q9HCX3 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF304Q9HCX3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF304Q9HCX3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ZNF304Q9HCX3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.56■■□□□ 1.04
ZNF304Q9HCX3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF304Q9HCX3 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF304Q9HCX3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF304Q9HCX3 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ZNF304Q9HCX3 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF304Q9HCX3 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF304Q9HCX3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF304Q9HCX3 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF304Q9HCX3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF304Q9HCX3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF304Q9HCX3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ZNF304Q9HCX3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ZNF304Q9HCX3 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.55■■□□□ 1.04
ZNF304Q9HCX3 ALDH1A3-203ENST00000557963 1670 ntBASIC21.54■■□□□ 1.04
ZNF304Q9HCX3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ZNF304Q9HCX3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ZNF304Q9HCX3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF304Q9HCX3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ZNF304Q9HCX3 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
ZNF304Q9HCX3 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
ZNF304Q9HCX3 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF304Q9HCX3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
ZNF304Q9HCX3 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
ZNF304Q9HCX3 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.53■■□□□ 1.04
ZNF304Q9HCX3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.53■■□□□ 1.04
ZNF304Q9HCX3 SRD5A1P1-201ENST00000442297 786 ntBASIC21.53■■□□□ 1.04
ZNF304Q9HCX3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.53■■□□□ 1.04
ZNF304Q9HCX3 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF304Q9HCX3 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.52■■□□□ 1.04
ZNF304Q9HCX3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF304Q9HCX3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
ZNF304Q9HCX3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.52■■□□□ 1.04
ZNF304Q9HCX3 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.52■■□□□ 1.04
ZNF304Q9HCX3 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
ZNF304Q9HCX3 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.52■■□□□ 1.04
ZNF304Q9HCX3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
ZNF304Q9HCX3 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
ZNF304Q9HCX3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.52■■□□□ 1.03
ZNF304Q9HCX3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
ZNF304Q9HCX3 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF304Q9HCX3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.51■■□□□ 1.03
ZNF304Q9HCX3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.51■■□□□ 1.03
ZNF304Q9HCX3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF304Q9HCX3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.51■■□□□ 1.03
ZNF304Q9HCX3 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
ZNF304Q9HCX3 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.51■■□□□ 1.03
ZNF304Q9HCX3 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.51■■□□□ 1.03
ZNF304Q9HCX3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.5■■□□□ 1.03
ZNF304Q9HCX3 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF304Q9HCX3 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF304Q9HCX3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.5■■□□□ 1.03
ZNF304Q9HCX3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF304Q9HCX3 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
ZNF304Q9HCX3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
ZNF304Q9HCX3 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.5■■□□□ 1.03
ZNF304Q9HCX3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms