Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PCDH18Q9HCL0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.62■■□□□ 1.37
PCDH18Q9HCL0 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDH18Q9HCL0 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH18Q9HCL0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH18Q9HCL0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
PCDH18Q9HCL0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDH18Q9HCL0 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH18Q9HCL0 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH18Q9HCL0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDH18Q9HCL0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
PCDH18Q9HCL0 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDH18Q9HCL0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PCDH18Q9HCL0 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.61■■□□□ 1.37
PCDH18Q9HCL0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PCDH18Q9HCL0 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDH18Q9HCL0 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDH18Q9HCL0 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH18Q9HCL0 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
PCDH18Q9HCL0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH18Q9HCL0 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
PCDH18Q9HCL0 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH18Q9HCL0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH18Q9HCL0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.6■■□□□ 1.37
PCDH18Q9HCL0 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDH18Q9HCL0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.6■■□□□ 1.37
PCDH18Q9HCL0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH18Q9HCL0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH18Q9HCL0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
PCDH18Q9HCL0 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH18Q9HCL0 AC021242.3-201ENST00000607598 1377 ntBASIC23.6■■□□□ 1.37
PCDH18Q9HCL0 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH18Q9HCL0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH18Q9HCL0 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH18Q9HCL0 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH18Q9HCL0 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH18Q9HCL0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH18Q9HCL0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH18Q9HCL0 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH18Q9HCL0 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDH18Q9HCL0 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.59■■□□□ 1.37
PCDH18Q9HCL0 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 BX664725.1-201ENST00000438252 379 ntBASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH18Q9HCL0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
PCDH18Q9HCL0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.36
PCDH18Q9HCL0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH18Q9HCL0 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH18Q9HCL0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
PCDH18Q9HCL0 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.57■■□□□ 1.36
PCDH18Q9HCL0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PCDH18Q9HCL0 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PCDH18Q9HCL0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH18Q9HCL0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH18Q9HCL0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PCDH18Q9HCL0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH18Q9HCL0 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.57■■□□□ 1.36
PCDH18Q9HCL0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH18Q9HCL0 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
PCDH18Q9HCL0 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH18Q9HCL0 DUSP8P5-201ENST00000422884 1815 ntBASIC23.56■■□□□ 1.36
PCDH18Q9HCL0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH18Q9HCL0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH18Q9HCL0 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PCDH18Q9HCL0 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH18Q9HCL0 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDH18Q9HCL0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH18Q9HCL0 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH18Q9HCL0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDH18Q9HCL0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH18Q9HCL0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH18Q9HCL0 ANOS2P-203ENST00000472227 1816 ntBASIC23.55■■□□□ 1.36
PCDH18Q9HCL0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH18Q9HCL0 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDH18Q9HCL0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH18Q9HCL0 AL451085.2-201ENST00000605085 799 ntBASIC23.55■■□□□ 1.36
PCDH18Q9HCL0 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.55■■□□□ 1.36
PCDH18Q9HCL0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH18Q9HCL0 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH18Q9HCL0 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
PCDH18Q9HCL0 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH18Q9HCL0 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH18Q9HCL0 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH18Q9HCL0 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH18Q9HCL0 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDH18Q9HCL0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms