Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF556Q9HAH1 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF556Q9HAH1 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF556Q9HAH1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF556Q9HAH1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF556Q9HAH1 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF556Q9HAH1 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF556Q9HAH1 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF556Q9HAH1 AC092068.2-201ENST00000590491 1708 ntBASIC21.01■□□□□ 0.95
ZNF556Q9HAH1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF556Q9HAH1 RAP2CP1-202ENST00000605179 643 ntBASIC21.01■□□□□ 0.95
ZNF556Q9HAH1 AL161729.1-201ENST00000604104 1402 ntBASIC21.01■□□□□ 0.95
ZNF556Q9HAH1 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF556Q9HAH1 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF556Q9HAH1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF556Q9HAH1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF556Q9HAH1 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF556Q9HAH1 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ZNF556Q9HAH1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ZNF556Q9HAH1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
ZNF556Q9HAH1 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ZNF556Q9HAH1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF556Q9HAH1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC21■□□□□ 0.95
ZNF556Q9HAH1 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF556Q9HAH1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF556Q9HAH1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21■□□□□ 0.95
ZNF556Q9HAH1 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF556Q9HAH1 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF556Q9HAH1 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF556Q9HAH1 AC026202.3-201ENST00000600805 1127 ntBASIC20.99■□□□□ 0.95
ZNF556Q9HAH1 DUSP8P3-201ENST00000399571 1760 ntBASIC20.99■□□□□ 0.95
ZNF556Q9HAH1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ZNF556Q9HAH1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF556Q9HAH1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF556Q9HAH1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF556Q9HAH1 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF556Q9HAH1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF556Q9HAH1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ZNF556Q9HAH1 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF556Q9HAH1 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF556Q9HAH1 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
ZNF556Q9HAH1 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ZNF556Q9HAH1 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
ZNF556Q9HAH1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.98■□□□□ 0.95
ZNF556Q9HAH1 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF556Q9HAH1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF556Q9HAH1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF556Q9HAH1 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF556Q9HAH1 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
ZNF556Q9HAH1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF556Q9HAH1 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF556Q9HAH1 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF556Q9HAH1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF556Q9HAH1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF556Q9HAH1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF556Q9HAH1 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF556Q9HAH1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF556Q9HAH1 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF556Q9HAH1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF556Q9HAH1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
ZNF556Q9HAH1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF556Q9HAH1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ZNF556Q9HAH1 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF556Q9HAH1 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF556Q9HAH1 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ZNF556Q9HAH1 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF556Q9HAH1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF556Q9HAH1 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.96■□□□□ 0.95
ZNF556Q9HAH1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
ZNF556Q9HAH1 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF556Q9HAH1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
ZNF556Q9HAH1 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF556Q9HAH1 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF556Q9HAH1 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
ZNF556Q9HAH1 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.95■□□□□ 0.94
ZNF556Q9HAH1 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
ZNF556Q9HAH1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF556Q9HAH1 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF556Q9HAH1 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF556Q9HAH1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF556Q9HAH1 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.95■□□□□ 0.94
ZNF556Q9HAH1 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.95■□□□□ 0.94
ZNF556Q9HAH1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF556Q9HAH1 AC090877.2-201ENST00000558441 1738 ntBASIC20.95■□□□□ 0.94
ZNF556Q9HAH1 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZNF556Q9HAH1 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ZNF556Q9HAH1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF556Q9HAH1 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ZNF556Q9HAH1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF556Q9HAH1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.94■□□□□ 0.94
ZNF556Q9HAH1 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF556Q9HAH1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF556Q9HAH1 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF556Q9HAH1 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.94■□□□□ 0.94
ZNF556Q9HAH1 EP400NL-214ENST00000641289 2402 ntBASIC20.94■□□□□ 0.94
ZNF556Q9HAH1 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF556Q9HAH1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF556Q9HAH1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF556Q9HAH1 C1orf229-201ENST00000623686 2258 ntBASIC20.93■□□□□ 0.94
ZNF556Q9HAH1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms