Protein–RNA interactions for Protein: Q9H5V8

CDCP1, CUB domain-containing protein 1, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1Q9H5V8 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
CDCP1Q9H5V8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDCP1Q9H5V8 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDCP1Q9H5V8 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDCP1Q9H5V8 AP003733.4-201ENST00000623785 1697 ntBASIC21.19■□□□□ 0.98
CDCP1Q9H5V8 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CDCP1Q9H5V8 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
CDCP1Q9H5V8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.19■□□□□ 0.98
CDCP1Q9H5V8 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDCP1Q9H5V8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDCP1Q9H5V8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CDCP1Q9H5V8 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CDCP1Q9H5V8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CDCP1Q9H5V8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCP1Q9H5V8 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
CDCP1Q9H5V8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCP1Q9H5V8 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.18■□□□□ 0.98
CDCP1Q9H5V8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCP1Q9H5V8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCP1Q9H5V8 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCP1Q9H5V8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CDCP1Q9H5V8 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDCP1Q9H5V8 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCP1Q9H5V8 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCP1Q9H5V8 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCP1Q9H5V8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.17■□□□□ 0.98
CDCP1Q9H5V8 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CDCP1Q9H5V8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCP1Q9H5V8 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCP1Q9H5V8 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CDCP1Q9H5V8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCP1Q9H5V8 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCP1Q9H5V8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCP1Q9H5V8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCP1Q9H5V8 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDCP1Q9H5V8 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.16■□□□□ 0.98
CDCP1Q9H5V8 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.16■□□□□ 0.98
CDCP1Q9H5V8 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDCP1Q9H5V8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CDCP1Q9H5V8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.15■□□□□ 0.98
CDCP1Q9H5V8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDCP1Q9H5V8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDCP1Q9H5V8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCP1Q9H5V8 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCP1Q9H5V8 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.15■□□□□ 0.98
CDCP1Q9H5V8 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCP1Q9H5V8 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCP1Q9H5V8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.14■□□□□ 0.98
CDCP1Q9H5V8 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDCP1Q9H5V8 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDCP1Q9H5V8 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
CDCP1Q9H5V8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDCP1Q9H5V8 AC142381.3-201ENST00000568208 1670 ntBASIC21.14■□□□□ 0.97
CDCP1Q9H5V8 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCP1Q9H5V8 AC138932.3-201ENST00000567634 1902 ntBASIC21.14■□□□□ 0.97
CDCP1Q9H5V8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.13■□□□□ 0.97
CDCP1Q9H5V8 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.13■□□□□ 0.97
CDCP1Q9H5V8 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCP1Q9H5V8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDCP1Q9H5V8 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.13■□□□□ 0.97
CDCP1Q9H5V8 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.13■□□□□ 0.97
CDCP1Q9H5V8 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.13■□□□□ 0.97
CDCP1Q9H5V8 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.13■□□□□ 0.97
CDCP1Q9H5V8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCP1Q9H5V8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCP1Q9H5V8 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCP1Q9H5V8 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CDCP1Q9H5V8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCP1Q9H5V8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDCP1Q9H5V8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCP1Q9H5V8 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCP1Q9H5V8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCP1Q9H5V8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CDCP1Q9H5V8 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.12■□□□□ 0.97
CDCP1Q9H5V8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCP1Q9H5V8 AL139246.5-201ENST00000606645 996 ntBASIC21.12■□□□□ 0.97
CDCP1Q9H5V8 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.12■□□□□ 0.97
CDCP1Q9H5V8 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.12■□□□□ 0.97
CDCP1Q9H5V8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CDCP1Q9H5V8 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDCP1Q9H5V8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.11■□□□□ 0.97
CDCP1Q9H5V8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.11■□□□□ 0.97
CDCP1Q9H5V8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDCP1Q9H5V8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CDCP1Q9H5V8 AC096631.2-201ENST00000436136 790 ntBASIC21.11■□□□□ 0.97
CDCP1Q9H5V8 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CDCP1Q9H5V8 AL161729.1-201ENST00000604104 1402 ntBASIC21.11■□□□□ 0.97
CDCP1Q9H5V8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.1■□□□□ 0.97
CDCP1Q9H5V8 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CDCP1Q9H5V8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDCP1Q9H5V8 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.1■□□□□ 0.97
CDCP1Q9H5V8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDCP1Q9H5V8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.1■□□□□ 0.97
CDCP1Q9H5V8 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CDCP1Q9H5V8 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CDCP1Q9H5V8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CDCP1Q9H5V8 AC019069.1-201ENST00000610008 1333 ntBASIC21.09■□□□□ 0.97
CDCP1Q9H5V8 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.09■□□□□ 0.97
CDCP1Q9H5V8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CDCP1Q9H5V8 SRD5A1P1-201ENST00000442297 786 ntBASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms