Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.6■■□□□ 1.53
CDH23Q9H251 MAP2K4P1-201ENST00000438453 1195 ntBASIC24.6■■□□□ 1.53
CDH23Q9H251 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC24.6■■□□□ 1.53
CDH23Q9H251 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
CDH23Q9H251 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC24.6■■□□□ 1.53
CDH23Q9H251 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDH23Q9H251 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDH23Q9H251 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CDH23Q9H251 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDH23Q9H251 GXYLT1P2-201ENST00000433312 1230 ntBASIC24.6■■□□□ 1.53
CDH23Q9H251 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC24.6■■□□□ 1.53
CDH23Q9H251 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
CDH23Q9H251 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDH23Q9H251 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
CDH23Q9H251 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
CDH23Q9H251 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDH23Q9H251 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.59■■□□□ 1.53
CDH23Q9H251 NME4-202ENST00000382940 766 ntTSL 3 BASIC24.59■■□□□ 1.53
CDH23Q9H251 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDH23Q9H251 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.59■■□□□ 1.53
CDH23Q9H251 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDH23Q9H251 REST-206ENST00000612429 1376 ntTSL 5 BASIC24.59■■□□□ 1.53
CDH23Q9H251 REST-207ENST00000616975 1370 ntTSL 5 BASIC24.59■■□□□ 1.53
CDH23Q9H251 BX842568.3-201ENST00000418104 571 ntBASIC24.59■■□□□ 1.53
CDH23Q9H251 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDH23Q9H251 HES6-206ENST00000409574 738 ntTSL 2 BASIC24.59■■□□□ 1.53
CDH23Q9H251 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC24.59■■□□□ 1.53
CDH23Q9H251 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
CDH23Q9H251 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC24.58■■□□□ 1.53
CDH23Q9H251 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC24.58■■□□□ 1.53
CDH23Q9H251 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.58■■□□□ 1.53
CDH23Q9H251 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
CDH23Q9H251 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDH23Q9H251 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.57■■□□□ 1.52
CDH23Q9H251 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC24.57■■□□□ 1.52
CDH23Q9H251 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDH23Q9H251 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.57■■□□□ 1.52
CDH23Q9H251 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDH23Q9H251 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC24.57■■□□□ 1.52
CDH23Q9H251 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
CDH23Q9H251 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDH23Q9H251 AL355802.2-201ENST00000402069 882 ntBASIC24.56■■□□□ 1.52
CDH23Q9H251 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDH23Q9H251 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.56■■□□□ 1.52
CDH23Q9H251 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDH23Q9H251 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CDH23Q9H251 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.56■■□□□ 1.52
CDH23Q9H251 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC24.55■■□□□ 1.52
CDH23Q9H251 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC24.55■■□□□ 1.52
CDH23Q9H251 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CDH23Q9H251 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CDH23Q9H251 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC24.55■■□□□ 1.52
CDH23Q9H251 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC24.55■■□□□ 1.52
CDH23Q9H251 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC24.55■■□□□ 1.52
CDH23Q9H251 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
CDH23Q9H251 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
CDH23Q9H251 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDH23Q9H251 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC24.54■■□□□ 1.52
CDH23Q9H251 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC24.53■■□□□ 1.52
CDH23Q9H251 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CDH23Q9H251 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC24.53■■□□□ 1.52
CDH23Q9H251 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDH23Q9H251 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.53■■□□□ 1.52
CDH23Q9H251 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC24.53■■□□□ 1.52
CDH23Q9H251 MIR3181-201ENST00000578512 73 ntBASIC24.53■■□□□ 1.52
CDH23Q9H251 AL499627.2-201ENST00000606283 725 ntBASIC24.53■■□□□ 1.52
CDH23Q9H251 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CDH23Q9H251 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC24.53■■□□□ 1.52
CDH23Q9H251 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDH23Q9H251 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDH23Q9H251 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC24.52■■□□□ 1.52
CDH23Q9H251 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CDH23Q9H251 GAS2L1P2-201ENST00000436355 1356 ntBASIC24.52■■□□□ 1.52
CDH23Q9H251 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC24.52■■□□□ 1.52
CDH23Q9H251 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CDH23Q9H251 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
CDH23Q9H251 AC073111.5-205ENST00000641717 521 ntBASIC24.51■■□□□ 1.51
CDH23Q9H251 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDH23Q9H251 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC24.51■■□□□ 1.51
CDH23Q9H251 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDH23Q9H251 AC131274.2-201ENST00000580697 1507 ntBASIC24.51■■□□□ 1.51
CDH23Q9H251 TSPY20P-201ENST00000450910 630 ntBASIC24.51■■□□□ 1.51
CDH23Q9H251 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.51■■□□□ 1.51
CDH23Q9H251 AC245100.8-202ENST00000629247 1058 ntBASIC24.51■■□□□ 1.51
CDH23Q9H251 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.51■■□□□ 1.51
CDH23Q9H251 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDH23Q9H251 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDH23Q9H251 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDH23Q9H251 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.5■■□□□ 1.51
CDH23Q9H251 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CDH23Q9H251 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDH23Q9H251 NTF6G-201ENST00000591094 616 ntBASIC24.5■■□□□ 1.51
CDH23Q9H251 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC24.49■■□□□ 1.51
CDH23Q9H251 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDH23Q9H251 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDH23Q9H251 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC24.49■■□□□ 1.51
CDH23Q9H251 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
CDH23Q9H251 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC24.49■■□□□ 1.51
CDH23Q9H251 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDH23Q9H251 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms