Protein–RNA interactions for Protein: Q9BWD3

RTL8A, Retrotransposon Gag-like protein 8A, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8AQ9BWD3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RTL8AQ9BWD3 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.43■□□□□ 0.7
RTL8AQ9BWD3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL8AQ9BWD3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RTL8AQ9BWD3 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL8AQ9BWD3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RTL8AQ9BWD3 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.43■□□□□ 0.7
RTL8AQ9BWD3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RTL8AQ9BWD3 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 KRT125P-201ENST00000546827 989 ntBASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 SNX5-217ENST00000606557 1087 ntBASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 AC021242.3-201ENST00000607598 1377 ntBASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RTL8AQ9BWD3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.4■□□□□ 0.7
RTL8AQ9BWD3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL8AQ9BWD3 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTL8AQ9BWD3 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL8AQ9BWD3 Z92544.1-202ENST00000571933 1220 ntBASIC19.4■□□□□ 0.7
RTL8AQ9BWD3 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RTL8AQ9BWD3 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL8AQ9BWD3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RTL8AQ9BWD3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
RTL8AQ9BWD3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RTL8AQ9BWD3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RTL8AQ9BWD3 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL8AQ9BWD3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RTL8AQ9BWD3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.39■□□□□ 0.69
RTL8AQ9BWD3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.39■□□□□ 0.69
RTL8AQ9BWD3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RTL8AQ9BWD3 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.39■□□□□ 0.69
RTL8AQ9BWD3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RTL8AQ9BWD3 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL8AQ9BWD3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RTL8AQ9BWD3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RTL8AQ9BWD3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RTL8AQ9BWD3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RTL8AQ9BWD3 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RTL8AQ9BWD3 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RTL8AQ9BWD3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.38■□□□□ 0.69
RTL8AQ9BWD3 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RTL8AQ9BWD3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RTL8AQ9BWD3 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.38■□□□□ 0.69
RTL8AQ9BWD3 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RTL8AQ9BWD3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL8AQ9BWD3 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.38■□□□□ 0.69
RTL8AQ9BWD3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL8AQ9BWD3 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RTL8AQ9BWD3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL8AQ9BWD3 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RTL8AQ9BWD3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC19.37■□□□□ 0.69
RTL8AQ9BWD3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL8AQ9BWD3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.36■□□□□ 0.69
RTL8AQ9BWD3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.36■□□□□ 0.69
RTL8AQ9BWD3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RTL8AQ9BWD3 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL8AQ9BWD3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RTL8AQ9BWD3 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RTL8AQ9BWD3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.36■□□□□ 0.69
RTL8AQ9BWD3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 11.5 ms