Protein–RNA interactions for Protein: Q9BR84

ZNF559, Zinc finger protein 559, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559Q9BR84 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.05■□□□□ 0.96
ZNF559Q9BR84 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF559Q9BR84 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF559Q9BR84 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF559Q9BR84 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
ZNF559Q9BR84 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF559Q9BR84 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF559Q9BR84 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF559Q9BR84 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF559Q9BR84 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC21.04■□□□□ 0.96
ZNF559Q9BR84 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.04■□□□□ 0.96
ZNF559Q9BR84 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ZNF559Q9BR84 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF559Q9BR84 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.04■□□□□ 0.96
ZNF559Q9BR84 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ZNF559Q9BR84 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ZNF559Q9BR84 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
ZNF559Q9BR84 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF559Q9BR84 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF559Q9BR84 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF559Q9BR84 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.03■□□□□ 0.96
ZNF559Q9BR84 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
ZNF559Q9BR84 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.03■□□□□ 0.96
ZNF559Q9BR84 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF559Q9BR84 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF559Q9BR84 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF559Q9BR84 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF559Q9BR84 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
ZNF559Q9BR84 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF559Q9BR84 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
ZNF559Q9BR84 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF559Q9BR84 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF559Q9BR84 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF559Q9BR84 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF559Q9BR84 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF559Q9BR84 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF559Q9BR84 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF559Q9BR84 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF559Q9BR84 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF559Q9BR84 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.01■□□□□ 0.95
ZNF559Q9BR84 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC21.01■□□□□ 0.95
ZNF559Q9BR84 UNC93B8-201ENST00000511903 705 ntBASIC21.01■□□□□ 0.95
ZNF559Q9BR84 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
ZNF559Q9BR84 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF559Q9BR84 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.01■□□□□ 0.95
ZNF559Q9BR84 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21■□□□□ 0.95
ZNF559Q9BR84 DUSP8P5-201ENST00000422884 1815 ntBASIC21■□□□□ 0.95
ZNF559Q9BR84 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC21■□□□□ 0.95
ZNF559Q9BR84 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21■□□□□ 0.95
ZNF559Q9BR84 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21■□□□□ 0.95
ZNF559Q9BR84 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
ZNF559Q9BR84 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
ZNF559Q9BR84 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21■□□□□ 0.95
ZNF559Q9BR84 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
ZNF559Q9BR84 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
ZNF559Q9BR84 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF559Q9BR84 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF559Q9BR84 TSPY9P-201ENST00000440215 945 ntBASIC20.98■□□□□ 0.95
ZNF559Q9BR84 TSPY11P-201ENST00000442607 1045 ntBASIC20.98■□□□□ 0.95
ZNF559Q9BR84 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.98■□□□□ 0.95
ZNF559Q9BR84 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.98■□□□□ 0.95
ZNF559Q9BR84 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF559Q9BR84 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF559Q9BR84 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF559Q9BR84 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF559Q9BR84 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF559Q9BR84 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF559Q9BR84 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF559Q9BR84 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.97■□□□□ 0.95
ZNF559Q9BR84 AC120024.1-201ENST00000562672 995 ntBASIC20.97■□□□□ 0.95
ZNF559Q9BR84 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.97■□□□□ 0.95
ZNF559Q9BR84 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.97■□□□□ 0.95
ZNF559Q9BR84 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF559Q9BR84 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.97■□□□□ 0.95
ZNF559Q9BR84 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.97■□□□□ 0.95
ZNF559Q9BR84 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.97■□□□□ 0.95
ZNF559Q9BR84 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.97■□□□□ 0.95
ZNF559Q9BR84 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF559Q9BR84 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.96■□□□□ 0.95
ZNF559Q9BR84 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.96■□□□□ 0.95
ZNF559Q9BR84 KRT18P24-201ENST00000344739 1156 ntBASIC20.96■□□□□ 0.95
ZNF559Q9BR84 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF559Q9BR84 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.96■□□□□ 0.95
ZNF559Q9BR84 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF559Q9BR84 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms