Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC26.56■■□□□ 1.84
PTPN18Q99952 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PTPN18Q99952 AC126544.1-201ENST00000580842 1059 ntBASIC26.56■■□□□ 1.84
PTPN18Q99952 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC26.56■■□□□ 1.84
PTPN18Q99952 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC26.56■■□□□ 1.84
PTPN18Q99952 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
PTPN18Q99952 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PTPN18Q99952 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PTPN18Q99952 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PTPN18Q99952 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
PTPN18Q99952 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PTPN18Q99952 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
PTPN18Q99952 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC26.55■■□□□ 1.84
PTPN18Q99952 TSPY26P-201ENST00000476365 1326 ntBASIC26.55■■□□□ 1.84
PTPN18Q99952 AC010501.1-201ENST00000606270 1962 ntBASIC26.55■■□□□ 1.84
PTPN18Q99952 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
PTPN18Q99952 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC26.54■■□□□ 1.84
PTPN18Q99952 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PTPN18Q99952 NME4-202ENST00000382940 766 ntTSL 3 BASIC26.54■■□□□ 1.84
PTPN18Q99952 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PTPN18Q99952 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC26.54■■□□□ 1.84
PTPN18Q99952 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PTPN18Q99952 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
PTPN18Q99952 NME4-211ENST00000620944 1193 ntTSL 2 BASIC26.54■■□□□ 1.84
PTPN18Q99952 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC26.54■■□□□ 1.84
PTPN18Q99952 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC26.54■■□□□ 1.84
PTPN18Q99952 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
PTPN18Q99952 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC26.54■■□□□ 1.84
PTPN18Q99952 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PTPN18Q99952 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC26.53■■□□□ 1.84
PTPN18Q99952 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC26.53■■□□□ 1.84
PTPN18Q99952 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
PTPN18Q99952 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PTPN18Q99952 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PTPN18Q99952 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
PTPN18Q99952 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC26.52■■□□□ 1.84
PTPN18Q99952 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PTPN18Q99952 AC027612.3-201ENST00000413684 1047 ntBASIC26.52■■□□□ 1.84
PTPN18Q99952 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC26.52■■□□□ 1.84
PTPN18Q99952 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PTPN18Q99952 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC26.52■■□□□ 1.84
PTPN18Q99952 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
PTPN18Q99952 VGF-203ENST00000611537 1622 ntTSL 5 BASIC26.52■■□□□ 1.84
PTPN18Q99952 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC26.52■■□□□ 1.84
PTPN18Q99952 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
PTPN18Q99952 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
PTPN18Q99952 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC26.51■■□□□ 1.83
PTPN18Q99952 AC123595.1-201ENST00000440769 1046 ntBASIC26.51■■□□□ 1.83
PTPN18Q99952 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC26.51■■□□□ 1.83
PTPN18Q99952 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC26.51■■□□□ 1.83
PTPN18Q99952 NKILA-201ENST00000613231 537 ntTSL 4 BASIC26.51■■□□□ 1.83
PTPN18Q99952 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.51■■□□□ 1.83
PTPN18Q99952 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
PTPN18Q99952 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC26.5■■□□□ 1.83
PTPN18Q99952 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PTPN18Q99952 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC26.5■■□□□ 1.83
PTPN18Q99952 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PTPN18Q99952 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PTPN18Q99952 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
PTPN18Q99952 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
PTPN18Q99952 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC26.49■■□□□ 1.83
PTPN18Q99952 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC26.49■■□□□ 1.83
PTPN18Q99952 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC26.49■■□□□ 1.83
PTPN18Q99952 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
PTPN18Q99952 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC26.49■■□□□ 1.83
PTPN18Q99952 GTSE1-AS1-202ENST00000623117 1518 ntBASIC26.49■■□□□ 1.83
PTPN18Q99952 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.49■■□□□ 1.83
PTPN18Q99952 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
PTPN18Q99952 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC26.48■■□□□ 1.83
PTPN18Q99952 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTPN18Q99952 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTPN18Q99952 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC26.48■■□□□ 1.83
PTPN18Q99952 VPS53-216ENST00000574029 585 ntTSL 4 BASIC26.48■■□□□ 1.83
PTPN18Q99952 pRNA.6-201ENST00000610482 90 ntBASIC26.48■■□□□ 1.83
PTPN18Q99952 pRNA.5-201ENST00000612139 90 ntBASIC26.48■■□□□ 1.83
PTPN18Q99952 pRNA.11-201ENST00000618423 90 ntBASIC26.48■■□□□ 1.83
PTPN18Q99952 pRNA.13-201ENST00000619112 90 ntBASIC26.48■■□□□ 1.83
PTPN18Q99952 AL358852.1-201ENST00000623174 1268 ntBASIC26.48■■□□□ 1.83
PTPN18Q99952 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTPN18Q99952 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTPN18Q99952 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC26.48■■□□□ 1.83
PTPN18Q99952 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.48■■□□□ 1.83
PTPN18Q99952 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PTPN18Q99952 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PTPN18Q99952 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC26.47■■□□□ 1.83
PTPN18Q99952 MIR6084-201ENST00000622012 110 ntBASIC26.47■■□□□ 1.83
PTPN18Q99952 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC26.47■■□□□ 1.83
PTPN18Q99952 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
PTPN18Q99952 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC26.47■■□□□ 1.83
PTPN18Q99952 AL022069.1-201ENST00000568025 1636 ntBASIC26.47■■□□□ 1.83
PTPN18Q99952 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC26.46■■□□□ 1.83
PTPN18Q99952 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
PTPN18Q99952 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
PTPN18Q99952 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
PTPN18Q99952 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.83
PTPN18Q99952 CCDC92B-201ENST00000575506 885 ntBASIC26.45■■□□□ 1.82
PTPN18Q99952 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
PTPN18Q99952 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
PTPN18Q99952 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
PTPN18Q99952 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.44■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms