Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SLC6A7Q99884 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.73■□□□□ 0.75
SLC6A7Q99884 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A7Q99884 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A7Q99884 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A7Q99884 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SLC6A7Q99884 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A7Q99884 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A7Q99884 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.72■□□□□ 0.75
SLC6A7Q99884 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SLC6A7Q99884 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A7Q99884 AL592295.1-201ENST00000400984 884 ntBASIC19.72■□□□□ 0.75
SLC6A7Q99884 GUSBP5-201ENST00000418136 578 ntBASIC19.72■□□□□ 0.75
SLC6A7Q99884 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.72■□□□□ 0.75
SLC6A7Q99884 MTX2-204ENST00000443241 799 ntTSL 3 BASIC19.72■□□□□ 0.75
SLC6A7Q99884 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A7Q99884 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SLC6A7Q99884 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A7Q99884 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A7Q99884 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SLC6A7Q99884 MIR6089-201ENST00000616698 64 ntBASIC19.71■□□□□ 0.75
SLC6A7Q99884 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC6A7Q99884 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SLC6A7Q99884 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.71■□□□□ 0.75
SLC6A7Q99884 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SLC6A7Q99884 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A7Q99884 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A7Q99884 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A7Q99884 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.7■□□□□ 0.74
SLC6A7Q99884 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.7■□□□□ 0.74
SLC6A7Q99884 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A7Q99884 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SLC6A7Q99884 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A7Q99884 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A7Q99884 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.7■□□□□ 0.74
SLC6A7Q99884 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.7■□□□□ 0.74
SLC6A7Q99884 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A7Q99884 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A7Q99884 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A7Q99884 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SLC6A7Q99884 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SLC6A7Q99884 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SLC6A7Q99884 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A7Q99884 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SLC6A7Q99884 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A7Q99884 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A7Q99884 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SLC6A7Q99884 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.69■□□□□ 0.74
SLC6A7Q99884 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A7Q99884 THA1P-201ENST00000590384 1145 ntBASIC19.69■□□□□ 0.74
SLC6A7Q99884 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A7Q99884 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SLC6A7Q99884 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
SLC6A7Q99884 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLC6A7Q99884 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A7Q99884 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SLC6A7Q99884 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC6A7Q99884 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
SLC6A7Q99884 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A7Q99884 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLC6A7Q99884 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.68■□□□□ 0.74
SLC6A7Q99884 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.68■□□□□ 0.74
SLC6A7Q99884 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SLC6A7Q99884 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SLC6A7Q99884 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A7Q99884 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SLC6A7Q99884 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.67■□□□□ 0.74
SLC6A7Q99884 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SLC6A7Q99884 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
SLC6A7Q99884 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLC6A7Q99884 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC6A7Q99884 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLC6A7Q99884 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC19.67■□□□□ 0.74
SLC6A7Q99884 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A7Q99884 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A7Q99884 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLC6A7Q99884 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SLC6A7Q99884 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A7Q99884 GALC-202ENST00000393568 2054 ntTSL 2 BASIC19.66■□□□□ 0.74
SLC6A7Q99884 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC6A7Q99884 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A7Q99884 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A7Q99884 AC087393.1-201ENST00000582896 145 ntBASIC19.66■□□□□ 0.74
SLC6A7Q99884 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.66■□□□□ 0.74
SLC6A7Q99884 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.66■□□□□ 0.74
SLC6A7Q99884 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A7Q99884 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SLC6A7Q99884 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A7Q99884 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLC6A7Q99884 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A7Q99884 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SLC6A7Q99884 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A7Q99884 AL117328.2-201ENST00000624617 1940 ntBASIC19.65■□□□□ 0.74
SLC6A7Q99884 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SLC6A7Q99884 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A7Q99884 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SLC6A7Q99884 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
SLC6A7Q99884 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SLC6A7Q99884 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.65■□□□□ 0.74
SLC6A7Q99884 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms