Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
SNX18Q96RF0 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.61■□□□□ 0.89
SNX18Q96RF0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.61■□□□□ 0.89
SNX18Q96RF0 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.61■□□□□ 0.89
SNX18Q96RF0 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNX18Q96RF0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SNX18Q96RF0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.61■□□□□ 0.89
SNX18Q96RF0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.6■□□□□ 0.89
SNX18Q96RF0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX18Q96RF0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.6■□□□□ 0.89
SNX18Q96RF0 LINC00565-201ENST00000562710 2331 ntBASIC20.6■□□□□ 0.89
SNX18Q96RF0 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SNX18Q96RF0 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SNX18Q96RF0 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX18Q96RF0 SLC25A24-204ENST00000569674 2357 ntBASIC20.59■□□□□ 0.89
SNX18Q96RF0 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNX18Q96RF0 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SNX18Q96RF0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX18Q96RF0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX18Q96RF0 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.59■□□□□ 0.89
SNX18Q96RF0 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.59■□□□□ 0.89
SNX18Q96RF0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX18Q96RF0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.59■□□□□ 0.89
SNX18Q96RF0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SNX18Q96RF0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SNX18Q96RF0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SNX18Q96RF0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
SNX18Q96RF0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.59■□□□□ 0.89
SNX18Q96RF0 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SNX18Q96RF0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.59■□□□□ 0.89
SNX18Q96RF0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
SNX18Q96RF0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX18Q96RF0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
SNX18Q96RF0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.58■□□□□ 0.89
SNX18Q96RF0 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
SNX18Q96RF0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
SNX18Q96RF0 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.58■□□□□ 0.89
SNX18Q96RF0 AC019171.1-201ENST00000601251 1056 ntBASIC20.58■□□□□ 0.89
SNX18Q96RF0 AC011551.1-201ENST00000614101 683 ntBASIC20.58■□□□□ 0.89
SNX18Q96RF0 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNX18Q96RF0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNX18Q96RF0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
SNX18Q96RF0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
SNX18Q96RF0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SNX18Q96RF0 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX18Q96RF0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNX18Q96RF0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.57■□□□□ 0.88
SNX18Q96RF0 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.57■□□□□ 0.88
SNX18Q96RF0 ABCB10P4-201ENST00000566803 2184 ntBASIC20.57■□□□□ 0.88
SNX18Q96RF0 BHLHE23-202ENST00000612929 1109 ntBASIC20.57■□□□□ 0.88
SNX18Q96RF0 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNX18Q96RF0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX18Q96RF0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
SNX18Q96RF0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
SNX18Q96RF0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
SNX18Q96RF0 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
SNX18Q96RF0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
SNX18Q96RF0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX18Q96RF0 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
SNX18Q96RF0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.56■□□□□ 0.88
SNX18Q96RF0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SNX18Q96RF0 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.56■□□□□ 0.88
SNX18Q96RF0 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
SNX18Q96RF0 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SNX18Q96RF0 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX18Q96RF0 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX18Q96RF0 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX18Q96RF0 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX18Q96RF0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX18Q96RF0 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX18Q96RF0 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX18Q96RF0 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.55■□□□□ 0.88
SNX18Q96RF0 AC022616.5-201ENST00000518796 181 ntBASIC20.55■□□□□ 0.88
SNX18Q96RF0 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX18Q96RF0 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SNX18Q96RF0 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX18Q96RF0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX18Q96RF0 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
SNX18Q96RF0 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX18Q96RF0 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX18Q96RF0 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.54■□□□□ 0.88
SNX18Q96RF0 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX18Q96RF0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX18Q96RF0 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX18Q96RF0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX18Q96RF0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.54■□□□□ 0.88
SNX18Q96RF0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.53■□□□□ 0.88
SNX18Q96RF0 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX18Q96RF0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX18Q96RF0 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX18Q96RF0 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX18Q96RF0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX18Q96RF0 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX18Q96RF0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.53■□□□□ 0.88
SNX18Q96RF0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX18Q96RF0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SNX18Q96RF0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
SNX18Q96RF0 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
SNX18Q96RF0 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX18Q96RF0 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms