Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S3Q96PC3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S3Q96PC3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.11■□□□□ 0.33
AP1S3Q96PC3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.11■□□□□ 0.33
AP1S3Q96PC3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S3Q96PC3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S3Q96PC3 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
AP1S3Q96PC3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC17.11■□□□□ 0.33
AP1S3Q96PC3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
AP1S3Q96PC3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
AP1S3Q96PC3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC17.09■□□□□ 0.33
AP1S3Q96PC3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S3Q96PC3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S3Q96PC3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S3Q96PC3 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S3Q96PC3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S3Q96PC3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.09■□□□□ 0.33
AP1S3Q96PC3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S3Q96PC3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.09■□□□□ 0.33
AP1S3Q96PC3 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
AP1S3Q96PC3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S3Q96PC3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S3Q96PC3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S3Q96PC3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
AP1S3Q96PC3 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
AP1S3Q96PC3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
AP1S3Q96PC3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
AP1S3Q96PC3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP1S3Q96PC3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.33
AP1S3Q96PC3 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
AP1S3Q96PC3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S3Q96PC3 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S3Q96PC3 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S3Q96PC3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S3Q96PC3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S3Q96PC3 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
AP1S3Q96PC3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
AP1S3Q96PC3 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S3Q96PC3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC17.07■□□□□ 0.32
AP1S3Q96PC3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
AP1S3Q96PC3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.07■□□□□ 0.32
AP1S3Q96PC3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
AP1S3Q96PC3 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC17.07■□□□□ 0.32
AP1S3Q96PC3 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S3Q96PC3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
AP1S3Q96PC3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S3Q96PC3 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC17.06■□□□□ 0.32
AP1S3Q96PC3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S3Q96PC3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
AP1S3Q96PC3 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.05■□□□□ 0.32
AP1S3Q96PC3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP1S3Q96PC3 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP1S3Q96PC3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP1S3Q96PC3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP1S3Q96PC3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP1S3Q96PC3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.05■□□□□ 0.32
AP1S3Q96PC3 MIR6089-201ENST00000616698 64 ntBASIC17.05■□□□□ 0.32
AP1S3Q96PC3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP1S3Q96PC3 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
AP1S3Q96PC3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
AP1S3Q96PC3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
AP1S3Q96PC3 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
AP1S3Q96PC3 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
AP1S3Q96PC3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
AP1S3Q96PC3 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 MLEC-202ENST00000412616 841 ntTSL 3 BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.04■□□□□ 0.32
AP1S3Q96PC3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms