Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 AC092171.4-201ENST00000609130 632 ntBASIC19.13■□□□□ 0.65
TIMD4Q96H15 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.13■□□□□ 0.65
TIMD4Q96H15 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIMD4Q96H15 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIMD4Q96H15 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TIMD4Q96H15 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIMD4Q96H15 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
TIMD4Q96H15 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIMD4Q96H15 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
TIMD4Q96H15 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC19.12■□□□□ 0.65
TIMD4Q96H15 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.12■□□□□ 0.65
TIMD4Q96H15 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
TIMD4Q96H15 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.12■□□□□ 0.65
TIMD4Q96H15 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIMD4Q96H15 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TIMD4Q96H15 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIMD4Q96H15 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TIMD4Q96H15 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.11■□□□□ 0.65
TIMD4Q96H15 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIMD4Q96H15 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIMD4Q96H15 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TIMD4Q96H15 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TIMD4Q96H15 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TIMD4Q96H15 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TIMD4Q96H15 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIMD4Q96H15 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.11■□□□□ 0.65
TIMD4Q96H15 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.11■□□□□ 0.65
TIMD4Q96H15 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
TIMD4Q96H15 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIMD4Q96H15 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TIMD4Q96H15 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TIMD4Q96H15 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.1■□□□□ 0.65
TIMD4Q96H15 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TIMD4Q96H15 SHF-207ENST00000560540 2062 ntTSL 5 BASIC19.1■□□□□ 0.65
TIMD4Q96H15 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.1■□□□□ 0.65
TIMD4Q96H15 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.1■□□□□ 0.65
TIMD4Q96H15 AC019069.1-201ENST00000610008 1333 ntBASIC19.1■□□□□ 0.65
TIMD4Q96H15 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TIMD4Q96H15 AC096631.2-201ENST00000436136 790 ntBASIC19.1■□□□□ 0.65
TIMD4Q96H15 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.1■□□□□ 0.65
TIMD4Q96H15 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC19.1■□□□□ 0.65
TIMD4Q96H15 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TIMD4Q96H15 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TIMD4Q96H15 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.09■□□□□ 0.65
TIMD4Q96H15 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TIMD4Q96H15 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TIMD4Q96H15 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TIMD4Q96H15 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TIMD4Q96H15 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.09■□□□□ 0.65
TIMD4Q96H15 DUX4L19-201ENST00000557448 1267 ntBASIC19.09■□□□□ 0.65
TIMD4Q96H15 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.09■□□□□ 0.65
TIMD4Q96H15 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.09■□□□□ 0.65
TIMD4Q96H15 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.09■□□□□ 0.65
TIMD4Q96H15 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TIMD4Q96H15 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.09■□□□□ 0.65
TIMD4Q96H15 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TIMD4Q96H15 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC19.08■□□□□ 0.65
TIMD4Q96H15 ALDH1A3-203ENST00000557963 1670 ntBASIC19.08■□□□□ 0.65
TIMD4Q96H15 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TIMD4Q96H15 AC138932.3-201ENST00000567634 1902 ntBASIC19.08■□□□□ 0.65
TIMD4Q96H15 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TIMD4Q96H15 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.08■□□□□ 0.65
TIMD4Q96H15 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TIMD4Q96H15 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TIMD4Q96H15 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TIMD4Q96H15 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.08■□□□□ 0.64
TIMD4Q96H15 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TIMD4Q96H15 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TIMD4Q96H15 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.64
TIMD4Q96H15 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TIMD4Q96H15 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
TIMD4Q96H15 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TIMD4Q96H15 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TIMD4Q96H15 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TIMD4Q96H15 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.07■□□□□ 0.64
TIMD4Q96H15 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TIMD4Q96H15 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TIMD4Q96H15 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC19.07■□□□□ 0.64
TIMD4Q96H15 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TIMD4Q96H15 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC19.06■□□□□ 0.64
TIMD4Q96H15 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TIMD4Q96H15 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.06■□□□□ 0.64
TIMD4Q96H15 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.06■□□□□ 0.64
TIMD4Q96H15 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMD4Q96H15 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMD4Q96H15 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.06■□□□□ 0.64
TIMD4Q96H15 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TIMD4Q96H15 AC020928.2-201ENST00000588717 2197 ntBASIC19.06■□□□□ 0.64
TIMD4Q96H15 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TIMD4Q96H15 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TIMD4Q96H15 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.05■□□□□ 0.64
TIMD4Q96H15 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TIMD4Q96H15 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.05■□□□□ 0.64
TIMD4Q96H15 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC19.05■□□□□ 0.64
TIMD4Q96H15 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.05■□□□□ 0.64
TIMD4Q96H15 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMD4Q96H15 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMD4Q96H15 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TIMD4Q96H15 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TIMD4Q96H15 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms