Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SLC47A1Q96FL8 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
SLC47A1Q96FL8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SLC47A1Q96FL8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC47A1Q96FL8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC47A1Q96FL8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.41■■□□□ 1.02
SLC47A1Q96FL8 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC47A1Q96FL8 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC47A1Q96FL8 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC47A1Q96FL8 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC47A1Q96FL8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.41■■□□□ 1.02
SLC47A1Q96FL8 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SLC47A1Q96FL8 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC47A1Q96FL8 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC47A1Q96FL8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SLC47A1Q96FL8 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.41■■□□□ 1.02
SLC47A1Q96FL8 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SLC47A1Q96FL8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC47A1Q96FL8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC47A1Q96FL8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.4■■□□□ 1.02
SLC47A1Q96FL8 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
SLC47A1Q96FL8 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.4■■□□□ 1.02
SLC47A1Q96FL8 C1orf229-201ENST00000623686 2258 ntBASIC21.4■■□□□ 1.02
SLC47A1Q96FL8 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
SLC47A1Q96FL8 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
SLC47A1Q96FL8 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.39■■□□□ 1.01
SLC47A1Q96FL8 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC47A1Q96FL8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC47A1Q96FL8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC21.39■■□□□ 1.01
SLC47A1Q96FL8 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.39■■□□□ 1.01
SLC47A1Q96FL8 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC47A1Q96FL8 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC47A1Q96FL8 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SLC47A1Q96FL8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC47A1Q96FL8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC47A1Q96FL8 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SLC47A1Q96FL8 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC47A1Q96FL8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC47A1Q96FL8 LINC00565-201ENST00000562710 2331 ntBASIC21.38■■□□□ 1.01
SLC47A1Q96FL8 RPS2P7-201ENST00000447334 885 ntBASIC21.38■■□□□ 1.01
SLC47A1Q96FL8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.38■■□□□ 1.01
SLC47A1Q96FL8 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC47A1Q96FL8 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC47A1Q96FL8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC47A1Q96FL8 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SLC47A1Q96FL8 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SLC47A1Q96FL8 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SLC47A1Q96FL8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC47A1Q96FL8 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC47A1Q96FL8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC47A1Q96FL8 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SLC47A1Q96FL8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.37■■□□□ 1.01
SLC47A1Q96FL8 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC47A1Q96FL8 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.37■■□□□ 1.01
SLC47A1Q96FL8 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
SLC47A1Q96FL8 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
SLC47A1Q96FL8 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC47A1Q96FL8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SLC47A1Q96FL8 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC47A1Q96FL8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC47A1Q96FL8 SPCS2P3-201ENST00000500401 656 ntBASIC21.36■■□□□ 1.01
SLC47A1Q96FL8 MIR6765-201ENST00000614092 87 ntBASIC21.36■■□□□ 1.01
SLC47A1Q96FL8 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.36■■□□□ 1.01
SLC47A1Q96FL8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SLC47A1Q96FL8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SLC47A1Q96FL8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
SLC47A1Q96FL8 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
SLC47A1Q96FL8 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
SLC47A1Q96FL8 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SLC47A1Q96FL8 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.35■■□□□ 1.01
SLC47A1Q96FL8 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
SLC47A1Q96FL8 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.35■■□□□ 1.01
SLC47A1Q96FL8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC47A1Q96FL8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC47A1Q96FL8 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC47A1Q96FL8 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC47A1Q96FL8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC47A1Q96FL8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.34■■□□□ 1.01
SLC47A1Q96FL8 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SLC47A1Q96FL8 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC21.34■■□□□ 1.01
SLC47A1Q96FL8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
SLC47A1Q96FL8 U85056.1-201ENST00000616429 682 ntBASIC21.34■■□□□ 1.01
SLC47A1Q96FL8 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
SLC47A1Q96FL8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC47A1Q96FL8 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SLC47A1Q96FL8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SLC47A1Q96FL8 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
SLC47A1Q96FL8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
SLC47A1Q96FL8 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC47A1Q96FL8 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SLC47A1Q96FL8 DUX4L9-201ENST00000449051 1259 ntBASIC21.33■■□□□ 1.01
SLC47A1Q96FL8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC21.33■■□□□ 1.01
SLC47A1Q96FL8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SLC47A1Q96FL8 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
SLC47A1Q96FL8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
SLC47A1Q96FL8 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC21.32■■□□□ 1
SLC47A1Q96FL8 AC087393.1-201ENST00000582896 145 ntBASIC21.32■■□□□ 1
SLC47A1Q96FL8 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SLC47A1Q96FL8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.32■■□□□ 1
SLC47A1Q96FL8 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms