Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNIH3Q8TBE1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNIH3Q8TBE1 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.81■□□□□ 0.92
CNIH3Q8TBE1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.81■□□□□ 0.92
CNIH3Q8TBE1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNIH3Q8TBE1 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CNIH3Q8TBE1 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CNIH3Q8TBE1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.81■□□□□ 0.92
CNIH3Q8TBE1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNIH3Q8TBE1 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.81■□□□□ 0.92
CNIH3Q8TBE1 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.81■□□□□ 0.92
CNIH3Q8TBE1 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CNIH3Q8TBE1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.8■□□□□ 0.92
CNIH3Q8TBE1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNIH3Q8TBE1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNIH3Q8TBE1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNIH3Q8TBE1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNIH3Q8TBE1 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNIH3Q8TBE1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CNIH3Q8TBE1 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CNIH3Q8TBE1 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CNIH3Q8TBE1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNIH3Q8TBE1 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.79■□□□□ 0.92
CNIH3Q8TBE1 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.79■□□□□ 0.92
CNIH3Q8TBE1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CNIH3Q8TBE1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.79■□□□□ 0.92
CNIH3Q8TBE1 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNIH3Q8TBE1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CNIH3Q8TBE1 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNIH3Q8TBE1 AL137060.1-201ENST00000618151 2648 ntBASIC20.78■□□□□ 0.92
CNIH3Q8TBE1 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNIH3Q8TBE1 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNIH3Q8TBE1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNIH3Q8TBE1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CNIH3Q8TBE1 ZNRF2P2-203ENST00000454624 420 ntBASIC20.78■□□□□ 0.92
CNIH3Q8TBE1 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.78■□□□□ 0.92
CNIH3Q8TBE1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.78■□□□□ 0.92
CNIH3Q8TBE1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CNIH3Q8TBE1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CNIH3Q8TBE1 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.77■□□□□ 0.92
CNIH3Q8TBE1 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNIH3Q8TBE1 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNIH3Q8TBE1 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.77■□□□□ 0.92
CNIH3Q8TBE1 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
CNIH3Q8TBE1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CNIH3Q8TBE1 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNIH3Q8TBE1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CNIH3Q8TBE1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.77■□□□□ 0.92
CNIH3Q8TBE1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.77■□□□□ 0.92
CNIH3Q8TBE1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.77■□□□□ 0.92
CNIH3Q8TBE1 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
CNIH3Q8TBE1 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CNIH3Q8TBE1 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.76■□□□□ 0.91
CNIH3Q8TBE1 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNIH3Q8TBE1 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
CNIH3Q8TBE1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.76■□□□□ 0.91
CNIH3Q8TBE1 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNIH3Q8TBE1 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CNIH3Q8TBE1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
CNIH3Q8TBE1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNIH3Q8TBE1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
CNIH3Q8TBE1 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNIH3Q8TBE1 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNIH3Q8TBE1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNIH3Q8TBE1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CNIH3Q8TBE1 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNIH3Q8TBE1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
CNIH3Q8TBE1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CNIH3Q8TBE1 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNIH3Q8TBE1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNIH3Q8TBE1 SMPD5-203ENST00000639008 1464 ntBASIC20.75■□□□□ 0.91
CNIH3Q8TBE1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CNIH3Q8TBE1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNIH3Q8TBE1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNIH3Q8TBE1 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.74■□□□□ 0.91
CNIH3Q8TBE1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNIH3Q8TBE1 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.74■□□□□ 0.91
CNIH3Q8TBE1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CNIH3Q8TBE1 RNF166-209ENST00000567844 633 ntTSL 5 BASIC20.74■□□□□ 0.91
CNIH3Q8TBE1 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.74■□□□□ 0.91
CNIH3Q8TBE1 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.74■□□□□ 0.91
CNIH3Q8TBE1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CNIH3Q8TBE1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.73■□□□□ 0.91
CNIH3Q8TBE1 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CNIH3Q8TBE1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNIH3Q8TBE1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CNIH3Q8TBE1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.73■□□□□ 0.91
CNIH3Q8TBE1 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.73■□□□□ 0.91
CNIH3Q8TBE1 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.73■□□□□ 0.91
CNIH3Q8TBE1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.73■□□□□ 0.91
CNIH3Q8TBE1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.73■□□□□ 0.91
CNIH3Q8TBE1 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CNIH3Q8TBE1 CR559946.2-201ENST00000623684 991 ntBASIC20.73■□□□□ 0.91
CNIH3Q8TBE1 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.73■□□□□ 0.91
CNIH3Q8TBE1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNIH3Q8TBE1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CNIH3Q8TBE1 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
CNIH3Q8TBE1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNIH3Q8TBE1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CNIH3Q8TBE1 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms