Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH19Q8TAB3 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDH19Q8TAB3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH19Q8TAB3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
PCDH19Q8TAB3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH19Q8TAB3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH19Q8TAB3 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC23.57■■□□□ 1.36
PCDH19Q8TAB3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH19Q8TAB3 PRTG-204ENST00000561292 833 ntTSL 3 BASIC23.57■■□□□ 1.36
PCDH19Q8TAB3 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH19Q8TAB3 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC23.57■■□□□ 1.36
PCDH19Q8TAB3 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
PCDH19Q8TAB3 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH19Q8TAB3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
PCDH19Q8TAB3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH19Q8TAB3 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH19Q8TAB3 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.56■■□□□ 1.36
PCDH19Q8TAB3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
PCDH19Q8TAB3 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH19Q8TAB3 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDH19Q8TAB3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH19Q8TAB3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.56■■□□□ 1.36
PCDH19Q8TAB3 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.56■■□□□ 1.36
PCDH19Q8TAB3 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
PCDH19Q8TAB3 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH19Q8TAB3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.55■■□□□ 1.36
PCDH19Q8TAB3 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDH19Q8TAB3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDH19Q8TAB3 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.55■■□□□ 1.36
PCDH19Q8TAB3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH19Q8TAB3 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH19Q8TAB3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH19Q8TAB3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
PCDH19Q8TAB3 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDH19Q8TAB3 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH19Q8TAB3 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH19Q8TAB3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDH19Q8TAB3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.54■■□□□ 1.36
PCDH19Q8TAB3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
PCDH19Q8TAB3 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PCDH19Q8TAB3 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 SNX5-217ENST00000606557 1087 ntBASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
PCDH19Q8TAB3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH19Q8TAB3 DUSP8P5-201ENST00000422884 1815 ntBASIC23.52■■□□□ 1.36
PCDH19Q8TAB3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH19Q8TAB3 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH19Q8TAB3 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
PCDH19Q8TAB3 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC23.52■■□□□ 1.36
PCDH19Q8TAB3 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.52■■□□□ 1.36
PCDH19Q8TAB3 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH19Q8TAB3 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PCDH19Q8TAB3 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDH19Q8TAB3 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH19Q8TAB3 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
PCDH19Q8TAB3 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.51■■□□□ 1.35
PCDH19Q8TAB3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.51■■□□□ 1.35
PCDH19Q8TAB3 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PCDH19Q8TAB3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDH19Q8TAB3 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
PCDH19Q8TAB3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC23.51■■□□□ 1.35
PCDH19Q8TAB3 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
PCDH19Q8TAB3 AC021242.3-201ENST00000607598 1377 ntBASIC23.51■■□□□ 1.35
PCDH19Q8TAB3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH19Q8TAB3 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH19Q8TAB3 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
PCDH19Q8TAB3 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDH19Q8TAB3 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PCDH19Q8TAB3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.5■■□□□ 1.35
PCDH19Q8TAB3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDH19Q8TAB3 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
PCDH19Q8TAB3 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC23.5■■□□□ 1.35
PCDH19Q8TAB3 ANOS2P-203ENST00000472227 1816 ntBASIC23.49■■□□□ 1.35
PCDH19Q8TAB3 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH19Q8TAB3 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH19Q8TAB3 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH19Q8TAB3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH19Q8TAB3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH19Q8TAB3 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.49■■□□□ 1.35
PCDH19Q8TAB3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDH19Q8TAB3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDH19Q8TAB3 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDH19Q8TAB3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.49■■□□□ 1.35
PCDH19Q8TAB3 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH19Q8TAB3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH19Q8TAB3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
PCDH19Q8TAB3 GUSBP5-201ENST00000418136 578 ntBASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms