Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 PVT1_1.1-201ENST00000615125 194 ntBASIC21.81■■□□□ 1.08
CLHC1Q8NHS4 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
CLHC1Q8NHS4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.81■■□□□ 1.08
CLHC1Q8NHS4 AL161729.1-201ENST00000604104 1402 ntBASIC21.8■■□□□ 1.08
CLHC1Q8NHS4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CLHC1Q8NHS4 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.8■■□□□ 1.08
CLHC1Q8NHS4 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.8■■□□□ 1.08
CLHC1Q8NHS4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLHC1Q8NHS4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLHC1Q8NHS4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.8■■□□□ 1.08
CLHC1Q8NHS4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
CLHC1Q8NHS4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC21.8■■□□□ 1.08
CLHC1Q8NHS4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC21.8■■□□□ 1.08
CLHC1Q8NHS4 AC019171.1-201ENST00000601251 1056 ntBASIC21.8■■□□□ 1.08
CLHC1Q8NHS4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLHC1Q8NHS4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CLHC1Q8NHS4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CLHC1Q8NHS4 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLHC1Q8NHS4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLHC1Q8NHS4 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLHC1Q8NHS4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.79■■□□□ 1.08
CLHC1Q8NHS4 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CLHC1Q8NHS4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLHC1Q8NHS4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.79■■□□□ 1.08
CLHC1Q8NHS4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLHC1Q8NHS4 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLHC1Q8NHS4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CLHC1Q8NHS4 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 AC120024.1-201ENST00000562672 995 ntBASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 AC010980.1-201ENST00000587192 1142 ntBASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CLHC1Q8NHS4 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLHC1Q8NHS4 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CLHC1Q8NHS4 AC022616.5-201ENST00000518796 181 ntBASIC21.77■■□□□ 1.08
CLHC1Q8NHS4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLHC1Q8NHS4 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CLHC1Q8NHS4 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLHC1Q8NHS4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CLHC1Q8NHS4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.77■■□□□ 1.07
CLHC1Q8NHS4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLHC1Q8NHS4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLHC1Q8NHS4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
CLHC1Q8NHS4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
CLHC1Q8NHS4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.76■■□□□ 1.07
CLHC1Q8NHS4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.76■■□□□ 1.07
CLHC1Q8NHS4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CLHC1Q8NHS4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CLHC1Q8NHS4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.76■■□□□ 1.07
CLHC1Q8NHS4 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CLHC1Q8NHS4 TSPY13P-201ENST00000338964 914 ntBASIC21.75■■□□□ 1.07
CLHC1Q8NHS4 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLHC1Q8NHS4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC21.75■■□□□ 1.07
CLHC1Q8NHS4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLHC1Q8NHS4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.75■■□□□ 1.07
CLHC1Q8NHS4 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLHC1Q8NHS4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLHC1Q8NHS4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.75■■□□□ 1.07
CLHC1Q8NHS4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CLHC1Q8NHS4 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
CLHC1Q8NHS4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CLHC1Q8NHS4 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLHC1Q8NHS4 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.74■■□□□ 1.07
CLHC1Q8NHS4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CLHC1Q8NHS4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLHC1Q8NHS4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLHC1Q8NHS4 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLHC1Q8NHS4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.74■■□□□ 1.07
CLHC1Q8NHS4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CLHC1Q8NHS4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CLHC1Q8NHS4 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CLHC1Q8NHS4 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CLHC1Q8NHS4 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLHC1Q8NHS4 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLHC1Q8NHS4 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.73■■□□□ 1.07
CLHC1Q8NHS4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLHC1Q8NHS4 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.73■■□□□ 1.07
CLHC1Q8NHS4 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
CLHC1Q8NHS4 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.73■■□□□ 1.07
CLHC1Q8NHS4 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.73■■□□□ 1.07
CLHC1Q8NHS4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
CLHC1Q8NHS4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CLHC1Q8NHS4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.73■■□□□ 1.07
CLHC1Q8NHS4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.72■■□□□ 1.07
CLHC1Q8NHS4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms