Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 MIR638-201ENST00000385237 100 ntBASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 RASSF1-AS1-201ENST00000629828 790 ntBASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CLDND2Q8NHS1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDND2Q8NHS1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.29■□□□□ 0.68
CLDND2Q8NHS1 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDND2Q8NHS1 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDND2Q8NHS1 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDND2Q8NHS1 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.29■□□□□ 0.68
CLDND2Q8NHS1 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDND2Q8NHS1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CLDND2Q8NHS1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.29■□□□□ 0.68
CLDND2Q8NHS1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDND2Q8NHS1 SLC6A10P-202ENST00000431994 2058 ntBASIC19.29■□□□□ 0.68
CLDND2Q8NHS1 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CLDND2Q8NHS1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDND2Q8NHS1 LINC00543-201ENST00000567234 1845 ntBASIC19.28■□□□□ 0.68
CLDND2Q8NHS1 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDND2Q8NHS1 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDND2Q8NHS1 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CLDND2Q8NHS1 AC138932.3-201ENST00000567634 1902 ntBASIC19.28■□□□□ 0.68
CLDND2Q8NHS1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDND2Q8NHS1 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CLDND2Q8NHS1 AC004448.1-201ENST00000458332 883 ntBASIC19.28■□□□□ 0.68
CLDND2Q8NHS1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.28■□□□□ 0.68
CLDND2Q8NHS1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.27■□□□□ 0.68
CLDND2Q8NHS1 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.27■□□□□ 0.68
CLDND2Q8NHS1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDND2Q8NHS1 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CLDND2Q8NHS1 AC110285.6-201ENST00000617652 491 ntBASIC19.27■□□□□ 0.68
CLDND2Q8NHS1 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CLDND2Q8NHS1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC19.27■□□□□ 0.67
CLDND2Q8NHS1 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CLDND2Q8NHS1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
CLDND2Q8NHS1 AC068473.5-201ENST00000616428 2072 ntBASIC19.26■□□□□ 0.67
CLDND2Q8NHS1 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDND2Q8NHS1 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDND2Q8NHS1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDND2Q8NHS1 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDND2Q8NHS1 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.26■□□□□ 0.67
CLDND2Q8NHS1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CLDND2Q8NHS1 AC096631.2-201ENST00000436136 790 ntBASIC19.26■□□□□ 0.67
CLDND2Q8NHS1 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CLDND2Q8NHS1 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDND2Q8NHS1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
CLDND2Q8NHS1 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDND2Q8NHS1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDND2Q8NHS1 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CLDND2Q8NHS1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDND2Q8NHS1 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.25■□□□□ 0.67
CLDND2Q8NHS1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDND2Q8NHS1 AC079834.2-201ENST00000609776 1949 ntBASIC19.25■□□□□ 0.67
CLDND2Q8NHS1 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDND2Q8NHS1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CLDND2Q8NHS1 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
CLDND2Q8NHS1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDND2Q8NHS1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDND2Q8NHS1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CLDND2Q8NHS1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDND2Q8NHS1 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CLDND2Q8NHS1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDND2Q8NHS1 AC022211.4-201ENST00000625094 2161 ntBASIC19.24■□□□□ 0.67
CLDND2Q8NHS1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDND2Q8NHS1 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.24■□□□□ 0.67
CLDND2Q8NHS1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CLDND2Q8NHS1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
CLDND2Q8NHS1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CLDND2Q8NHS1 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CLDND2Q8NHS1 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDND2Q8NHS1 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDND2Q8NHS1 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDND2Q8NHS1 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.23■□□□□ 0.67
CLDND2Q8NHS1 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDND2Q8NHS1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDND2Q8NHS1 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CLDND2Q8NHS1 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDND2Q8NHS1 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDND2Q8NHS1 MIR6089-201ENST00000616698 64 ntBASIC19.22■□□□□ 0.67
CLDND2Q8NHS1 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.22■□□□□ 0.67
CLDND2Q8NHS1 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CLDND2Q8NHS1 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CLDND2Q8NHS1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CLDND2Q8NHS1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CLDND2Q8NHS1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms