Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
SPTSSBQ8NFR3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
SPTSSBQ8NFR3 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPTSSBQ8NFR3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC12.59□□□□□ -0.39
SPTSSBQ8NFR3 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
SPTSSBQ8NFR3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SPTSSBQ8NFR3 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPTSSBQ8NFR3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC12.59□□□□□ -0.39
SPTSSBQ8NFR3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
SPTSSBQ8NFR3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPTSSBQ8NFR3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPTSSBQ8NFR3 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPTSSBQ8NFR3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SPTSSBQ8NFR3 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPTSSBQ8NFR3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SPTSSBQ8NFR3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPTSSBQ8NFR3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SPTSSBQ8NFR3 LINC00565-201ENST00000562710 2331 ntBASIC12.58□□□□□ -0.4
SPTSSBQ8NFR3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SPTSSBQ8NFR3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPTSSBQ8NFR3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPTSSBQ8NFR3 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SPTSSBQ8NFR3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SPTSSBQ8NFR3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SPTSSBQ8NFR3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SPTSSBQ8NFR3 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPTSSBQ8NFR3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SPTSSBQ8NFR3 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPTSSBQ8NFR3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
SPTSSBQ8NFR3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPTSSBQ8NFR3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC12.56□□□□□ -0.4
SPTSSBQ8NFR3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPTSSBQ8NFR3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPTSSBQ8NFR3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPTSSBQ8NFR3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.56□□□□□ -0.4
SPTSSBQ8NFR3 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
SPTSSBQ8NFR3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC12.56□□□□□ -0.4
SPTSSBQ8NFR3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
SPTSSBQ8NFR3 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SPTSSBQ8NFR3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 AC120498.9-201ENST00000339021 3867 ntBASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SPTSSBQ8NFR3 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms