Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 AC091305.1-201ENST00000479476 895 ntBASIC6.95□□□□□ -1.3
SYNE1Q8NF91 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 TMEM202-AS1-202ENST00000565181 2325 ntBASIC6.95□□□□□ -1.3
SYNE1Q8NF91 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 MIR6722-201ENST00000617286 78 ntBASIC6.95□□□□□ -1.3
SYNE1Q8NF91 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
SYNE1Q8NF91 AC131274.2-201ENST00000580697 1507 ntBASIC6.95□□□□□ -1.3
SYNE1Q8NF91 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 AC142381.2-201ENST00000566120 298 ntBASIC6.94□□□□□ -1.3
SYNE1Q8NF91 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 LBH-205ENST00000407930 756 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 AL136967.2-201ENST00000623968 743 ntBASIC6.94□□□□□ -1.3
SYNE1Q8NF91 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC6.94□□□□□ -1.3
SYNE1Q8NF91 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 AC105265.2-201ENST00000467189 838 ntBASIC6.93□□□□□ -1.3
SYNE1Q8NF91 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 AC034268.1-201ENST00000441047 882 ntBASIC6.93□□□□□ -1.3
SYNE1Q8NF91 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 STOX2-205ENST00000513034 807 ntTSL 3 BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 AC090192.1-201ENST00000517740 490 ntBASIC6.93□□□□□ -1.3
SYNE1Q8NF91 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 AC097639.1-201ENST00000565519 1891 ntBASIC6.93□□□□□ -1.3
SYNE1Q8NF91 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 SRD5A1P1-201ENST00000442297 786 ntBASIC6.93□□□□□ -1.3
SYNE1Q8NF91 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 AC136469.2-201ENST00000623944 1028 ntBASIC6.93□□□□□ -1.3
SYNE1Q8NF91 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
SYNE1Q8NF91 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE1Q8NF91 TSPY26P-201ENST00000476365 1326 ntBASIC6.92□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms