Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC34.4■■■■□ 3.1
ABCA6Q8N139 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
ABCA6Q8N139 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC34.39■■■■□ 3.1
ABCA6Q8N139 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC34.39■■■■□ 3.1
ABCA6Q8N139 MIR6089-201ENST00000616698 64 ntBASIC34.39■■■■□ 3.1
ABCA6Q8N139 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
ABCA6Q8N139 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
ABCA6Q8N139 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
ABCA6Q8N139 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
ABCA6Q8N139 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
ABCA6Q8N139 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
ABCA6Q8N139 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC34.38■■■■□ 3.09
ABCA6Q8N139 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC34.38■■■■□ 3.09
ABCA6Q8N139 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC34.38■■■■□ 3.09
ABCA6Q8N139 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA6Q8N139 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC34.37■■■■□ 3.09
ABCA6Q8N139 VPS53-216ENST00000574029 585 ntTSL 4 BASIC34.37■■■■□ 3.09
ABCA6Q8N139 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC34.37■■■■□ 3.09
ABCA6Q8N139 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC34.37■■■■□ 3.09
ABCA6Q8N139 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC34.37■■■■□ 3.09
ABCA6Q8N139 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC34.37■■■■□ 3.09
ABCA6Q8N139 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC34.37■■■■□ 3.09
ABCA6Q8N139 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
ABCA6Q8N139 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC34.37■■■■□ 3.09
ABCA6Q8N139 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC34.37■■■■□ 3.09
ABCA6Q8N139 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC34.37■■■■□ 3.09
ABCA6Q8N139 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA6Q8N139 AC123595.1-201ENST00000440769 1046 ntBASIC34.36■■■■□ 3.09
ABCA6Q8N139 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
ABCA6Q8N139 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC34.35■■■■□ 3.09
ABCA6Q8N139 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC34.35■■■■□ 3.09
ABCA6Q8N139 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC34.35■■■■□ 3.09
ABCA6Q8N139 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
ABCA6Q8N139 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
ABCA6Q8N139 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
ABCA6Q8N139 MIR6084-201ENST00000622012 110 ntBASIC34.35■■■■□ 3.09
ABCA6Q8N139 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC34.35■■■■□ 3.09
ABCA6Q8N139 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
ABCA6Q8N139 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC34.35■■■■□ 3.09
ABCA6Q8N139 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC34.35■■■■□ 3.09
ABCA6Q8N139 SHF-206ENST00000560471 2499 ntTSL 5 BASIC34.34■■■■□ 3.09
ABCA6Q8N139 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC34.34■■■■□ 3.09
ABCA6Q8N139 CCDC92B-201ENST00000575506 885 ntBASIC34.34■■■■□ 3.09
ABCA6Q8N139 AC126544.1-201ENST00000580842 1059 ntBASIC34.34■■■■□ 3.09
ABCA6Q8N139 VGF-203ENST00000611537 1622 ntTSL 5 BASIC34.34■■■■□ 3.09
ABCA6Q8N139 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC34.34■■■■□ 3.09
ABCA6Q8N139 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC34.34■■■■□ 3.09
ABCA6Q8N139 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
ABCA6Q8N139 IGHV3-19-201ENST00000521488 291 ntBASIC34.33■■■■□ 3.09
ABCA6Q8N139 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC34.33■■■■□ 3.09
ABCA6Q8N139 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC34.33■■■■□ 3.09
ABCA6Q8N139 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC34.33■■■■□ 3.09
ABCA6Q8N139 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC34.33■■■■□ 3.09
ABCA6Q8N139 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC34.33■■■■□ 3.09
ABCA6Q8N139 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC34.33■■■■□ 3.09
ABCA6Q8N139 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC34.33■■■■□ 3.09
ABCA6Q8N139 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC34.32■■■■□ 3.09
ABCA6Q8N139 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC34.32■■■■□ 3.09
ABCA6Q8N139 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC34.32■■■■□ 3.08
ABCA6Q8N139 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
ABCA6Q8N139 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
ABCA6Q8N139 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC34.31■■■■□ 3.08
ABCA6Q8N139 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC34.31■■■■□ 3.08
ABCA6Q8N139 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC34.31■■■■□ 3.08
ABCA6Q8N139 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC34.31■■■■□ 3.08
ABCA6Q8N139 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC34.31■■■■□ 3.08
ABCA6Q8N139 AL358852.1-201ENST00000623174 1268 ntBASIC34.31■■■■□ 3.08
ABCA6Q8N139 NME4-202ENST00000382940 766 ntTSL 3 BASIC34.3■■■■□ 3.08
ABCA6Q8N139 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC34.3■■■■□ 3.08
ABCA6Q8N139 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC34.3■■■■□ 3.08
ABCA6Q8N139 NME4-211ENST00000620944 1193 ntTSL 2 BASIC34.3■■■■□ 3.08
ABCA6Q8N139 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
ABCA6Q8N139 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC34.3■■■■□ 3.08
ABCA6Q8N139 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC34.3■■■■□ 3.08
ABCA6Q8N139 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC34.3■■■■□ 3.08
ABCA6Q8N139 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC34.3■■■■□ 3.08
ABCA6Q8N139 GTSE1-AS1-202ENST00000623117 1518 ntBASIC34.3■■■■□ 3.08
ABCA6Q8N139 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC34.29■■■■□ 3.08
ABCA6Q8N139 AICDA-202ENST00000537228 667 ntTSL 5 BASIC34.29■■■■□ 3.08
ABCA6Q8N139 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC34.29■■■■□ 3.08
ABCA6Q8N139 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC34.29■■■■□ 3.08
ABCA6Q8N139 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC34.29■■■■□ 3.08
ABCA6Q8N139 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
ABCA6Q8N139 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC34.28■■■■□ 3.08
ABCA6Q8N139 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC34.28■■■■□ 3.08
ABCA6Q8N139 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC34.28■■■■□ 3.08
ABCA6Q8N139 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC34.28■■■■□ 3.08
ABCA6Q8N139 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC34.28■■■■□ 3.08
ABCA6Q8N139 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC34.28■■■■□ 3.08
ABCA6Q8N139 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC34.27■■■■□ 3.08
ABCA6Q8N139 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC34.27■■■■□ 3.08
ABCA6Q8N139 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC34.27■■■■□ 3.08
ABCA6Q8N139 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC34.27■■■■□ 3.08
ABCA6Q8N139 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
ABCA6Q8N139 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
ABCA6Q8N139 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC34.27■■■■□ 3.08
ABCA6Q8N139 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC34.26■■■■□ 3.08
ABCA6Q8N139 KRT18P14-201ENST00000534205 1250 ntBASIC34.26■■■■□ 3.08
ABCA6Q8N139 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC34.26■■■■□ 3.08
ABCA6Q8N139 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC34.26■■■■□ 3.08
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms