Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
VPS36Q86VN1 ANOS2P-203ENST00000472227 1816 ntBASIC24.46■■□□□ 1.51
VPS36Q86VN1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
VPS36Q86VN1 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC24.46■■□□□ 1.51
VPS36Q86VN1 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC24.46■■□□□ 1.51
VPS36Q86VN1 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
VPS36Q86VN1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
VPS36Q86VN1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
VPS36Q86VN1 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
VPS36Q86VN1 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
VPS36Q86VN1 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC24.45■■□□□ 1.5
VPS36Q86VN1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.45■■□□□ 1.5
VPS36Q86VN1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC24.45■■□□□ 1.5
VPS36Q86VN1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS36Q86VN1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
VPS36Q86VN1 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS36Q86VN1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS36Q86VN1 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS36Q86VN1 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
VPS36Q86VN1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
VPS36Q86VN1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.44■■□□□ 1.5
VPS36Q86VN1 GAK-223ENST00000628912 497 ntTSL 5 BASIC24.44■■□□□ 1.5
VPS36Q86VN1 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.44■■□□□ 1.5
VPS36Q86VN1 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
VPS36Q86VN1 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.43■■□□□ 1.5
VPS36Q86VN1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC24.43■■□□□ 1.5
VPS36Q86VN1 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
VPS36Q86VN1 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
VPS36Q86VN1 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC24.43■■□□□ 1.5
VPS36Q86VN1 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC24.43■■□□□ 1.5
VPS36Q86VN1 DUX4L18-201ENST00000553347 1267 ntBASIC24.43■■□□□ 1.5
VPS36Q86VN1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
VPS36Q86VN1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
VPS36Q86VN1 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
VPS36Q86VN1 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
VPS36Q86VN1 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
VPS36Q86VN1 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
VPS36Q86VN1 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
VPS36Q86VN1 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
VPS36Q86VN1 AC092068.2-201ENST00000590491 1708 ntBASIC24.41■■□□□ 1.5
VPS36Q86VN1 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
VPS36Q86VN1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.41■■□□□ 1.5
VPS36Q86VN1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
VPS36Q86VN1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
VPS36Q86VN1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.41■■□□□ 1.5
VPS36Q86VN1 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
VPS36Q86VN1 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
VPS36Q86VN1 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC24.4■■□□□ 1.5
VPS36Q86VN1 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
VPS36Q86VN1 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
VPS36Q86VN1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
VPS36Q86VN1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
VPS36Q86VN1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
VPS36Q86VN1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.4■■□□□ 1.5
VPS36Q86VN1 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
VPS36Q86VN1 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
VPS36Q86VN1 BHLHE23-202ENST00000612929 1109 ntBASIC24.4■■□□□ 1.5
VPS36Q86VN1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC24.4■■□□□ 1.5
VPS36Q86VN1 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
VPS36Q86VN1 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
VPS36Q86VN1 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
VPS36Q86VN1 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
VPS36Q86VN1 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
VPS36Q86VN1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.5
VPS36Q86VN1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
VPS36Q86VN1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
VPS36Q86VN1 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
VPS36Q86VN1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
VPS36Q86VN1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
VPS36Q86VN1 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
VPS36Q86VN1 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
VPS36Q86VN1 ALDH1A3-203ENST00000557963 1670 ntBASIC24.39■■□□□ 1.49
VPS36Q86VN1 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
VPS36Q86VN1 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
VPS36Q86VN1 AC131274.2-201ENST00000580697 1507 ntBASIC24.39■■□□□ 1.49
VPS36Q86VN1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
VPS36Q86VN1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
VPS36Q86VN1 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
VPS36Q86VN1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
VPS36Q86VN1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.38■■□□□ 1.49
VPS36Q86VN1 C9orf163-202ENST00000624034 2573 ntBASIC24.38■■□□□ 1.49
VPS36Q86VN1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.37■■□□□ 1.49
VPS36Q86VN1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
VPS36Q86VN1 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
VPS36Q86VN1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.37■■□□□ 1.49
VPS36Q86VN1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC24.37■■□□□ 1.49
VPS36Q86VN1 AC074183.2-201ENST00000623112 922 ntBASIC24.37■■□□□ 1.49
VPS36Q86VN1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC24.37■■□□□ 1.49
VPS36Q86VN1 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC24.37■■□□□ 1.49
VPS36Q86VN1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
VPS36Q86VN1 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
VPS36Q86VN1 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
VPS36Q86VN1 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.36■■□□□ 1.49
VPS36Q86VN1 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
VPS36Q86VN1 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
VPS36Q86VN1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
VPS36Q86VN1 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
VPS36Q86VN1 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
VPS36Q86VN1 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
VPS36Q86VN1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms